SMTL ID : 5hu0.1 (1 other biounit)

BACE1 in complex with 4-(3-(furan-2-carboxamido)phenyl)-1-methyl-5-oxo-4-phenylimidazolidin-2-iminium

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.83 Å

Oligo State

monomer

Ligands

1 x TLA: L(+)-TARTARIC ACID(Non-covalent)

TLA.1: 5 residues within 4Å: Chain A: R.26, N.47, H.68, R.69, N.133 11 PLIP interactions: 11 interactions with chain A Hydrogen bonds: A:N.47, A:R.69, A:N.133 Water bridges: A:N.47, A:R.69, A:R.69, A:R.69 Salt bridges: A:R.26, A:H.68, A:R.69, A:R.69

1 x 66H: N-{3-[(2E,4R)-2-imino-1-methyl-5-oxo-4-phenylimidazolidin-4-yl]phenyl}furan-2-carboxamide(Non-covalent)

66H.2: 20 residues within 4Å: Chain A: S.29, G.30, Q.31, G.32, L.49, D.51, G.53, S.54, V.88, Y.90, W.95, F.127, I.129, W.134, I.137, D.247, S.248, G.249, T.250, T.251 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.88, A:Y.90, A:Y.90, A:F.127, A:I.137 Hydrogen bonds: A:G.249 Water bridges: A:G.53 Salt bridges: A:D.51, A:D.247

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Scott, J.D. et al., Discovery of the 3-Imino-1,2,4-thiadiazinane 1,1-Dioxide Derivative Verubecestat (MK-8931)-A beta-Site Amyloid Precursor Protein Cleaving Enzyme 1 Inhibitor for the Treatment of Alzheimer's Disease. J. Med. Chem. (2016)

Release Date

2016-11-09

Peptides

Beta-secretase 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Beta-secretase 1

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