SMTL ID : 5i2f.1

Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) with bound sulfamide inhibitor Bio-AMS

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.25 Å

Oligo State

homo-dimer

Ligands

2 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 3 residues within 4Å: Chain A: F.36, K.86, D.90 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.90, A:D.90 EDO.3: 6 residues within 4Å: Chain B: R.15, P.16, G.17, G.18, K.61, H.62 3 PLIP interactions: 3 interactions with chain B Hydrogen bonds: B:G.17, B:G.18, B:H.62

1 x BS5: 5'-deoxy-5'-[({5-[(3aS,4S,6aR)-2-oxohexahydro-1H-thieno[3,4-d]imidazol-4-yl]pentanoyl}sulfamoyl)amino]adenosine(Non-covalent)

BS5.2: 17 residues within 4Å: Chain A: W.126 Chain B: I.21, F.22, I.25, F.44, H.45, D.46, I.47, S.48, L.56, N.102, G.108, Q.109, S.110, V.111, H.115, H.117 13 PLIP interactions: 12 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:I.47, B:S.48, B:S.48, B:N.102, B:S.110, B:S.110, B:V.111, B:H.115 Water bridges: B:P.31, B:D.46, B:S.48, B:N.102, A:W.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Shah, R. et al., Design, Synthesis, and Characterization of Sulfamide and Sulfamate Nucleotidomimetic Inhibitors of hHint1. Acs Med.Chem.Lett. (2016)

Release Date

2016-06-22

Peptides

Histidine triad nucleotide-binding protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
A

Histidine triad nucleotide-binding protein 1

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