SMTL ID : 5ick.2 (1 other biounit)

A unique binding model of FXR LBD with feroline

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.47 Å

Oligo State

hetero-1-1-mer

Ligands

2 x FEZ: (1S,2S,3Z,5S,8Z)-5-hydroxy-5,9-dimethyl-2-(propan-2-yl)cyclodeca-3,8-dien-1-yl 4-hydroxybenzoate(Non-covalent)

FEZ.1: 19 residues within 4Å: Chain A: M.22, P.23, Q.24, I.26, T.27, M.47, N.50, H.51, S.89, A.90, I.92, F.93, L.97, L.105, I.109, M.122, F.123, Y.126 Ligands: FEZ.2 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:I.26, A:T.27, A:M.47, A:I.92, A:I.92, A:L.105, A:I.109, A:F.123, A:Y.126 Hydrogen bonds: A:N.50, A:Y.126 Salt bridges: A:H.51 FEZ.2: 20 residues within 4Å: Chain A: F.41, L.44, T.45, M.47, A.48, H.51, M.85, F.86, S.89, I.114, M.122, Y.126, H.204, M.207, W.211, K.217, F.218, L.222, W.226 Ligands: FEZ.1 14 PLIP interactions: 14 interactions with chain A Hydrophobic interactions: A:F.41, A:L.44, A:L.44, A:M.47, A:H.51, A:I.114, A:W.211, A:F.218, A:L.222, A:W.226 Hydrogen bonds: A:S.89, A:S.89, A:Y.126 Salt bridges: A:H.204

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Zheng, W. et al., A Novel Class of Natural FXR Modulators with a Unique Mode of Selective Co-regulator Assembly. Chembiochem (2017)

Release Date

2017-03-08

Peptides

Bile acid receptor: A
Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
C

Bile acid receptor

Nuclear receptor coactivator 2

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