SMTL ID : 5yxj.1 (1 other biounit)

FXR ligand binding domain

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.62 Å

Oligo State

hetero-1-1-mer

Ligands

1 x 93U: 2-[benzyl(methyl)amino]ethyl methyl 2,6-dimethyl-4-(3-nitrophenyl)pyridine-3,5-dicarboxylate(Non-covalent)

93U.1: 20 residues within 4Å: Chain A: L.44, M.47, A.48, H.51, V.82, M.85, F.86, S.89, I.92, L.105, I.109, I.114, I.119, M.122, Y.126, H.204, M.207, L.208, V.213, W.226 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:V.82, A:F.86, A:F.86, A:L.105, A:I.109, A:L.208, A:W.226 Hydrogen bonds: A:H.204 pi-Stacking: A:F.86

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yi, L. et al., A ligand of drug binding to FXR. To Be Published

Release Date

2019-03-13

Peptides

Bile acid receptor: A
Peptide from Nuclear receptor coactivator 2: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

Bile acid receptor

Peptide from Nuclear receptor coactivator 2

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