SMTL ID : 5km6.1

Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) H112N mutant Ara-A nucleoside phosphoramidate substrate complex

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

homo-dimer

Ligands

2 x 6US: [(2~{R},3~{S},4~{S},5~{R})-5-(6-aminopurin-9-yl)-3,4-bis(oxidanyl)oxolan-2-yl]methoxy-~{N}-[2-(1~{H}-indol-3-yl)ethyl]phosphonamidic acid(Non-covalent)

6US.1: 20 residues within 4Å: Chain A: I.21, F.22, I.25, F.44, H.45, D.46, I.47, L.56, N.102, G.108, Q.109, S.110, V.111, N.115, H.117 Chain B: R.98, Q.123, M.124, H.125, W.126 9 PLIP interactions: 8 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:I.47, A:N.102, A:S.110, A:S.110, A:V.111, A:N.115 Water bridges: A:P.31 pi-Stacking: A:F.22 Hydrophobic interactions: B:W.126 6US.2: 20 residues within 4Å: Chain A: R.98, Q.123, M.124, H.125, W.126 Chain B: I.21, F.22, I.25, F.44, H.45, D.46, I.47, L.56, N.102, G.108, Q.109, S.110, V.111, N.115, H.117 9 PLIP interactions: 8 interactions with chain B, 1 interactions with chain A Hydrogen bonds: B:I.47, B:N.102, B:S.110, B:S.110, B:V.111, B:N.115 Water bridges: B:P.31 pi-Stacking: B:F.22 Hydrophobic interactions: A:W.126

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Maize, K.M. et al., A Crystal Structure Based Guide to the Design of Human Histidine Triad Nucleotide Binding Protein 1 (hHint1) Activated ProTides. Mol. Pharm. (2017)

Release Date

2017-06-28

Peptides

Histidine triad nucleotide-binding protein 1: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Histidine triad nucleotide-binding protein 1

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