SMTL ID : 5kr0.1

Protease E35D-APV

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

homo-dimer

Ligands

1 x 478: {3-[(4-AMINO-BENZENESULFONYL)-ISOBUTYL-AMINO]-1-BENZYL-2-HYDROXY-PROPYL}-CARBAMIC ACID TETRAHYDRO-FURAN-3-YL ESTER(Non-covalent)

478.1: 22 residues within 4Å: Chain A: N.25, G.27, A.28, D.30, I.47, G.48, G.49, I.50, P.81, V.82, I.84 Chain B: L.23, N.25, G.27, A.28, D.29, D.30, V.32, G.48, G.49, I.50, V.82 17 PLIP interactions: 9 interactions with chain A, 8 interactions with chain B Hydrophobic interactions: A:A.28, A:I.47, A:P.81, A:V.82, A:I.84, B:L.23, B:V.82 Hydrogen bonds: A:N.25, A:D.30, A:D.30, B:N.25, B:G.27, B:G.27, B:D.29, B:D.30 Water bridges: A:I.50, B:I.50

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 5 residues within 4Å: Chain B: E.34, D.35, R.57, G.78, P.79 5 PLIP interactions: 5 interactions with chain B Hydrogen bonds: B:D.35, B:R.57 Water bridges: B:E.34, B:V.77, B:T.80

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liu, Z. et al., Effects of Hinge-region Natural Polymorphisms on Human Immunodeficiency Virus-Type 1 Protease Structure, Dynamics, and Drug Pressure Evolution. J.Biol.Chem. (2016)

Release Date

2016-09-21

Peptides

Protease E35D-APV: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Protease E35D-APV

Related Entries With Identical Sequence