SMTL ID : 5l2u.1 (1 other biounit)

Oligomer crystal structure of CC chemokine 5 (CCL5)

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.28 Å

Oligo State

homo-hexamer

Ligands

2 x EPE: 4-(2-HYDROXYETHYL)-1-PIPERAZINE ETHANESULFONIC ACID(Non-functional Binders)

EPE.1: 7 residues within 4Å: Chain A: S.28, G.29, K.30, C.31, S.32, N.33, P.34 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:G.29 EPE.5: 7 residues within 4Å: Chain F: S.28, G.29, K.30, C.31, S.32, N.33, P.34 1 PLIP interactions: 1 interactions with chain F Hydrogen bonds: F:G.29

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.2: 1 residues within 4Å: Chain A: K.52 Ligand excluded by PLIP CL.6: 0 residues within 4Å: (No contacts) Ligand excluded by PLIP

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.3: 5 residues within 4Å: Chain A: Y.24, F.25, Y.26, E.63 Ligands: GOL.4 No protein-ligand interaction detected (PLIP) GOL.4: 3 residues within 4Å: Chain A: Y.24, E.63 Ligands: GOL.3 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.63

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Liang, W. et al., High resolution oligomer crystal structure of CC chemokine 5 (CCL5). To Be Published

Release Date

2017-08-09

Peptides

C-C motif chemokine 5: ABCDEF

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
E

F
F

C-C motif chemokine 5

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