SMTL ID : 5l8r.1

The structure of plant photosystem I super-complex at 2.6 angstrom resolution.

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.60 Å
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
7 x LUT: (3R,3'R,6S)-4,5-DIDEHYDRO-5,6-DIHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
27 x BCR: BETA-CAROTENE(Non-covalent)
142 x CLA: CHLOROPHYLL A(Non-covalent)
13 x CHL: CHLOROPHYLL B(Non-covalent)
7 x LHG: 1,2-DIPALMITOYL-PHOSPHATIDYL-GLYCEROLE(Non-covalent)
20 x LMG: 1,2-DISTEAROYL-MONOGALACTOSYL-DIGLYCERIDE(Non-covalent)(Non-functional Binders)
2 x XAT: (3S,5R,6S,3'S,5'R,6'S)-5,6,5',6'-DIEPOXY-5,6,5',6'- TETRAHYDRO-BETA,BETA-CAROTENE-3,3'-DIOL(Non-covalent)
10 x LMT: DODECYL-BETA-D-MALTOSIDE(Non-covalent)
2 x CA: CALCIUM ION(Non-covalent)
5 x DGD: DIGALACTOSYL DIACYL GLYCEROL (DGDG)(Non-covalent)
1 x CL0: CHLOROPHYLL A ISOMER(Non-covalent)
3 x SF4: IRON/SULFUR CLUSTER(Non-covalent)
2 x PQN: PHYLLOQUINONE(Non-covalent)
1 x ZEX: (1R,2S)-4-{(1E,3E,5E,7E,9E,11E,13E,15E,17E)-18-[(4S)-4-hydroxy-2,6,6-trimethylcyclohex-1-en-1-yl]-3,7,12,16-tetramethyloctadeca-1,3,5,7,9,11,13,15,17-nonaen-1-yl}-2,5,5-trimethylcyclohex-3-en-1-ol(Non-covalent)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Mazor, Y. et al., Structure of the plant photosystem I supercomplex at 2.6 angstrom resolution. Nat Plants (2017)
Release Date
2017-03-15
Peptides
Lhca1: A
Chlorophyll a-b binding protein, chloroplastic: B
Chlorophyll a-b binding protein 3, chloroplastic: C
Chlorophyll a-b binding protein P4, chloroplastic: D
Photosystem I P700 chlorophyll a apoprotein A1: E
Photosystem I P700 chlorophyll a apoprotein A2: F
Photosystem I iron-sulfur center: G
PsaD: H
Putative uncharacterized protein: I
Photosystem I reaction center subunit III: J
PsaG: K
Photosystem I reaction center subunit VI: L
Photosystem I reaction center subunit VIII: M
Photosystem I reaction center subunit IX: N
Photosystem I reaction center subunit X psaK: O
Putative uncharacterized protein: P
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
1
B
2
C
3
D
4
E
A
F
B
G
C
H
D
I
E
J
F
K
G
L
H
M
I
N
J
O
K
P
L
Membrane
We predict this structure to be a membrane protein.

Lhca1

Chlorophyll a-b binding protein, chloroplastic

Chlorophyll a-b binding protein 3, chloroplastic

Chlorophyll a-b binding protein P4, chloroplastic

Photosystem I P700 chlorophyll a apoprotein A1

Photosystem I P700 chlorophyll a apoprotein A2

Photosystem I iron-sulfur center

PsaD

Putative uncharacterized protein

Photosystem I reaction center subunit III

PsaG

Photosystem I reaction center subunit VI

Photosystem I reaction center subunit VIII

Photosystem I reaction center subunit IX

Photosystem I reaction center subunit X psaK

Putative uncharacterized protein

Related Entries With Identical Sequence

2wsc.1 | 2wse.1 | 2wsf.1 | 3lw5.1 | 4rku.1 | 4y28.1 | 6ly5.1 | 6yac.1 | 6yez.1 | 6zoo.1 | 6zxs.1 | 7dkz.1