SMTL ID : 5lbv.1

Structural basis of zika and dengue virus potent antibody cross-neutralization

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

homo-dimer

Ligands

1 x NAG- NAG- BMA- MAN- FUC: alpha-D-mannopyranose-(1-3)-beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-[alpha-L-fucopyranose-(1-6)]2-acetamido-2-deoxy-beta-D-glucopyranose

NAG-NAG-BMA-MAN-FUC.1: 6 residues within 4Å: Chain B: H.148, G.150, M.151, V.153, N.154, T.156 No protein-ligand interaction detected (PLIP)

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 5 residues within 4Å: Chain B: H.158, D.161, E.162, R.164, T.179 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:E.162

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barba-Spaeth, G. et al., Structural basis of potent Zika-dengue virus antibody cross-neutralization. Nature (2016)

Release Date

2016-07-06

Peptides

envelope protein E: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

envelope protein E

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