SMTL ID : 5lug.2 (1 other biounit)

Crystal structure of human Spindlin-2B protein in complex with ART(M3L)QTA(2MR)KS peptide

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-2-2-mer

Ligands

1 x 2MR: N3, N4-DIMETHYLARGININE(Non-covalent)

2MR.1: 5 residues within 4Å: Chain A: W.25, Y.44, I.47, Y.51 Chain D: A.7 3 PLIP interactions: 1 interactions with chain D, 2 interactions with chain A Hydrogen bonds: D:A.7, A:Y.51 Water bridges: A:Y.51

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 4 residues within 4Å: Chain A: D.102, E.103, W.104, K.125 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.103 Water bridges: A:K.125 EDO.3: 4 residues within 4Å: Chain A: E.95, G.96, G.99, S.100 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.96, A:G.99 Water bridges: A:E.95 EDO.4: 4 residues within 4Å: Chain A: D.137, E.140, D.142 Chain D: R.2 5 PLIP interactions: 2 interactions with chain A, 3 interactions with chain D Hydrogen bonds: A:D.137 Water bridges: A:D.136, D:A.1, D:A.1, D:R.2 EDO.5: 6 residues within 4Å: Chain B: N.36, L.39, E.54, K.199, F.200, D.201 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:N.36, B:D.201

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Srikannathasan, V., Crystal structure of human Spindlin-2B protein in complex with ART(M3L)QTA(2MR)KS peptide. To be published

Release Date

2017-09-20

Peptides

Spindlin-like protein 2, isoform CRA_a: AB
ALA-ARG-THR-M3L-GLN-THR-ALA-2MR-LYS-SER: CD

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

B
D

C
G

D
E

Spindlin-like protein 2, isoform CRA_a

ALA-ARG-THR-M3L-GLN-THR-ALA-2MR-LYS-SER

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