SMTL ID : 7klr.1

Solution structure of the PHD1 domain of histone demethylase KDM5A in complex with a histone H3(1-10) peptide

Coordinates

PDB Format Compare

Method

SOLUTION NMR

Oligo State

hetero-1-1-mer

Ligands

2 x ZN: ZINC ION(Non-covalent)

ZN.1: 4 residues within 4Å: Chain A: C.11, C.14, H.34, C.37 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.11, A:C.14, A:H.34, A:C.37 ZN.2: 4 residues within 4Å: Chain A: C.26, C.29, C.52, C.55 4 PLIP interactions: 4 interactions with chain A Metal complexes: A:C.26, A:C.29, A:C.52, A:C.55

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Longbotham, J.E. et al., Recognition of Histone H3 Methylation States by the PHD1 Domain of Histone Demethylase KDM5A. Acs Chem.Biol. (2021)

Release Date

2021-03-03

Peptides

Lysine-specific demethylase 5A: A
Histone H3.1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Lysine-specific demethylase 5A

Histone H3.1

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