SMTL ID : 5mg2.1

Crystal structure of the second bromodomain of human TAF1 in complex with BAY-299 chemical probe

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.75 Å

Oligo State

monomer

Ligands

3 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 4 residues within 4Å: Chain A: M.22, H.31, H.32, E.53 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:H.31 EDO.2: 3 residues within 4Å: Chain A: Y.103, Q.104, T.107 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:T.107 EDO.3: 4 residues within 4Å: Chain A: V.7, S.10, F.11, H.62 No protein-ligand interaction detected (PLIP)

1 x 7M8: 6-(3-oxidanylpropyl)-2-(1,3,6-trimethyl-2-oxidanylidene-benzimidazol-5-yl)benzo[de]isoquinoline-1,3-dione(Non-covalent)

7M8.4: 11 residues within 4Å: Chain A: W.28, P.29, F.30, H.32, P.33, V.34, N.35, V.39, Y.84, N.85, Y.91 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:P.29, A:H.32, A:V.34, A:N.35, A:V.39 Hydrogen bonds: A:N.35, A:N.85 pi-Stacking: A:Y.91

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Bouche, L. et al., Benzoisoquinolinediones as Potent and Selective Inhibitors of BRPF2 and TAF1/TAF1L Bromodomains. J. Med. Chem. (2017)

Release Date

2017-05-03

Peptides

Transcription initiation factor TFIID subunit 1: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Transcription initiation factor TFIID subunit 1

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