SMTL ID : 5mlw.1

Crystal structure of human PCNA in complex with ZRANB3 APIM motif peptide

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.45 Å

Oligo State

homo-trimer

Ligands

7 x SO4: SULFATE ION(Non-functional Binders)

SO4.1: 5 residues within 4Å: Chain A: R.53, E.238, K.240, G.245, H.246 3 PLIP interactions: 3 interactions with chain A Salt bridges: A:R.53, A:K.240, A:H.246 SO4.2: 5 residues within 4Å: Chain A: A.82, G.83, N.84, E.85 Chain B: R.146 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain A Salt bridges: B:R.146 Hydrogen bonds: A:N.84, A:N.84 SO4.3: 4 residues within 4Å: Chain B: R.53, K.240, G.245, H.246 7 PLIP interactions: 7 interactions with chain B Water bridges: B:R.53, B:R.53, B:R.53, B:G.245 Salt bridges: B:R.53, B:K.240, B:H.246 SO4.4: 4 residues within 4Å: Chain B: A.82, G.83, N.84 Chain C: R.146 5 PLIP interactions: 4 interactions with chain B, 1 interactions with chain C Hydrogen bonds: B:N.84, B:N.84, B:E.85 Salt bridges: B:K.13, C:R.146 SO4.5: 5 residues within 4Å: Chain C: R.53, E.238, K.240, G.245, H.246 3 PLIP interactions: 3 interactions with chain C Salt bridges: C:R.53, C:K.240, C:H.246 SO4.6: 4 residues within 4Å: Chain A: R.146 Chain C: A.82, G.83, N.84 3 PLIP interactions: 1 interactions with chain A, 2 interactions with chain C Salt bridges: A:R.146 Hydrogen bonds: C:N.84, C:N.84 SO4.7: 4 residues within 4Å: Chain C: S.152, D.156, L.209, R.210 2 PLIP interactions: 2 interactions with chain C Water bridges: C:S.152, C:G.155

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Sebesta, M. et al., Structural insights into the function of ZRANB3 in replication stress response. Nat Commun (2017)

Release Date

2017-06-28

Peptides

Proliferating cell nuclear antigen: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
E

Proliferating cell nuclear antigen

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