SMTL ID : 5mo3.1

Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 8.5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.69 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x GLC- GLC: alpha-D-glucopyranose-(1-1)-alpha-D-glucopyranose(Non-covalent)

GLC-GLC.1: 4 residues within 4Å: Chain C: K.147, D.148, I.149, W.168 2 PLIP interactions: 2 interactions with chain C Hydrogen bonds: C:I.149, C:I.149

4 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.2: 5 residues within 4Å: Chain B: P.9, E.155, P.156, P.207, A.208 2 PLIP interactions: 2 interactions with chain B Water bridges: B:P.9, B:E.155 PGE.3: 5 residues within 4Å: Chain B: Q.43, L.45, E.46 Chain C: T.102, F.103 3 PLIP interactions: 1 interactions with chain B, 2 interactions with chain C Hydrogen bonds: B:Q.43, C:F.103, C:F.103 PGE.4: 6 residues within 4Å: Chain B: H.171, T.172, P.174 Chain C: T.169, D.170, D.172 4 PLIP interactions: 1 interactions with chain B, 3 interactions with chain C Hydrogen bonds: B:H.171, C:D.170, C:D.170, C:D.170 PGE.5: 4 residues within 4Å: Chain C: P.65, R.67, F.68, Q.85 4 PLIP interactions: 4 interactions with chain C Hydrogen bonds: C:R.67, C:Q.85 Water bridges: C:Q.43, C:Q.43

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Skrabana, R. et al., Crystal structure of DC8E8 Fab in the complex with a 14-mer tau peptide at pH 8.5. To be published

Release Date

2018-05-02

Peptides

Microtubule-associated protein tau: A
Fab of monoclonal antibody, heavy chain: B
Fab of monoclonal antibody, light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
H

C
L

Microtubule-associated protein tau

Fab of monoclonal antibody, heavy chain

Fab of monoclonal antibody, light chain

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