SMTL ID : 5n8j.1

CRYSTAL STRUCTURE OF STREPTAVIDIN WITH PEPTIDE D-amino acid containing peptide GyGlanvdessG

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.05 Å

Oligo State

hetero-4-3-mer

Ligands

1 x IPA: ISOPROPYL ALCOHOL(Non-functional Binders)

IPA.1: 7 residues within 4Å: Chain C: W.103, T.114, W.116, W.132, L.134, D.152 Chain D: W.144 4 PLIP interactions: 4 interactions with chain C Hydrophobic interactions: C:W.103, C:W.116, C:W.132, C:L.134

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lyamichev, V.I. et al., Stepwise Evolution Improves Identification of Diverse Peptides Binding to a Protein Target. Sci Rep (2017)

Release Date

2017-10-25

Peptides

Streptavidin: ABCD
GLY-DTY-GLY-DLE-DAL-DSG-DVA-DAS-DGL-DSN-DSN-GLY: EFG

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

C
C

D
D

E
P

F
O

G
E

Streptavidin

GLY-DTY-GLY-DLE-DAL-DSG-DVA-DAS-DGL-DSN-DSN-GLY

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