SMTL ID : 5nem.1

Localised reconstruction of alpha v beta 6 bound to Foot and Mouth Disease Virus O PanAsia - Pose A.

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-mer
Ligands
2 x NAG- NAG- MAN: alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
1 x MAN- MAN: alpha-D-mannopyranose-(1-2)-alpha-D-mannopyranose(Non-covalent)
1 x NAG- NAG- MAN- MAN: alpha-D-mannopyranose-(1-3)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
1 x NAG- NAG- MAN- MAN: alpha-D-mannopyranose-(1-4)-alpha-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Non-covalent)
3 x MAN: alpha-D-mannopyranose(Non-functional Binders)(Non-covalent)
3 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)(Non-functional Binders)(Non-covalent)
4 x CA: CALCIUM ION(Non-covalent)(Post Translational Modification)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Kotecha, A. et al., Rules of engagement between alpha v beta 6 integrin and foot-and-mouth disease virus. Nat Commun (2017)
Release Date
2017-06-21
Peptides
O PanAsia VP1: A
O PanAsia VP2: B
O PanAsia VP3: C
O PanAsia VP4: D
Integrin alpha-V: E
Integrin beta-6: F
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
1
B
2
C
3
D
4
E
A
F
B

O PanAsia VP1

O PanAsia VP2

O PanAsia VP3

O PanAsia VP4

Integrin alpha-V

Integrin beta-6

Related Entries With Identical Sequence

5ne4.1 | 5ne4.2 | 5ne4.3 | 5ne4.4 | 5ned.1 | 5ned.2 | 5ned.3 | 5ned.4 | 5ner.1 | 5net.1 | 5neu.1 | 5neu.2 | 5neu.3 | 5neu.4