SMTL ID : 5nkl.1

Crystal structure of the large fragment of DNA polymerase I from Thermus Aquaticus in a closed ternary complex with the artificial base pair dDs-dPxTP

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 1.70 Å
Oligo State
monomer
Ligands
2 x MG: MAGNESIUM ION(Non-covalent)
1 x ACT: ACETATE ION(Non-functional Binders)
1 x 91T: [[(2~{R},3~{S},5~{R})-5-[4-[(4~{R})-4,5-bis(oxidanyl)pent-1-ynyl]-2-nitro-pyrrol-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate(Non-covalent)
1 x 91R: [[(2~{R},3~{S},5~{R})-5-[4-[(4~{S})-4,5-bis(oxidanyl)pent-1-ynyl]-2-nitro-pyrrol-1-yl]-3-oxidanyl-oxolan-2-yl]methoxy-oxidanyl-phosphoryl] phosphono hydrogen phosphate(Non-covalent)
2 x GOL: GLYCEROL(Non-functional Binders)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Betz, K. et al., Structural Basis for Expansion of the Genetic Alphabet with an Artificial Nucleobase Pair. Angew. Chem. Int. Ed. Engl. (2017)
Release Date
2017-06-28
Peptides
DNA polymerase I, thermostable: A
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
A

DNA polymerase I, thermostable

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1jxe.1 | 3ktq.1 | 3lwl.1 | 3lwm.1 | 3m8r.1 | 3m8s.1 | 3ojs.1 | 3oju.1 | 3rr7.1 | 3rr8.1 | 3rrg.1 | 3rrh.1 | 3rtv.1 | 3sv3.1 | 3sv4.1 | 3syz.1 | 3sz2.1 | 3t3f.1 | 4c8k.1 | 4c8l.1 | 4c8m.1 | 4c8n.1 | 4c8o.1 | 4cch.1 | 4df4.1 | 4df8.1 | 4dfj.1 | 4dfk.1 | 4dfm.1 | 4dfp.1  more...