SMTL ID : 5or9.1

Crystal Structure of BAZ2B bromodomain in complex with 1-methyl-cyclopentapyrazole compound 13

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

monomer

Ligands

1 x JR5: (2~{S})-1-(4-fluorophenyl)sulfonyl-~{N}-(2-methyl-5,6-dihydro-4~{H}-cyclopenta[c]pyrazol-3-yl)pyrrolidine-2-carboxamide(Non-covalent)

JR5.1: 9 residues within 4Å: Chain A: W.32, P.33, F.34, L.36, P.37, V.38, F.88, N.89, I.95 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:L.36, A:V.38, A:F.88, A:I.95 Hydrogen bonds: A:P.33, A:N.89 Water bridges: A:V.38 pi-Stacking: A:W.32

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 3 residues within 4Å: Chain A: L.40, K.41, P.44 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.41

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Marchand, J.R. et al., Discovery of Inhibitors of Four Bromodomains by Fragment-Anchored Ligand Docking. J Chem Inf Model (2017)

Release Date

2017-09-13

Peptides

Bromodomain adjacent to zinc finger domain protein 2B: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Bromodomain adjacent to zinc finger domain protein 2B

Related Entries With Identical Sequence