SMTL ID : 5qhr.1

PanDDA analysis group deposition of models with modelled events (e.g. bound ligands) -- Crystal Structure of human FAM83B in complex with FMOPL000635a

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 1.68 Å

Oligo State

homo-dimer

Ligands

4 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 5 residues within 4Å: Chain A: I.7, D.8, L.9 Chain B: L.151, S.154 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:L.9 EDO.2: 5 residues within 4Å: Chain A: T.24, K.27, M.28, K.124, I.146 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:K.124 EDO.4: 5 residues within 4Å: Chain A: L.151, S.154 Chain B: I.7, D.8, L.9 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:D.8, B:L.9 EDO.5: 5 residues within 4Å: Chain B: T.24, K.27, M.28, K.124, I.146 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:K.124

2 x GQS: N-(3-fluorophenyl)-5-methyl-1,3,4-thiadiazol-2-amine(Non-covalent)

GQS.3: 6 residues within 4Å: Chain A: L.119, C.122, D.156, F.159, R.160, Y.163 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:L.119, A:D.156 Hydrogen bonds: A:D.156 pi-Stacking: A:Y.63, A:Y.163 GQS.6: 6 residues within 4Å: Chain B: L.119, C.122, D.156, F.159, R.160, Y.163 5 PLIP interactions: 5 interactions with chain B Hydrophobic interactions: B:L.119, B:D.156 Hydrogen bonds: B:D.156 pi-Stacking: B:Y.63, B:Y.163

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Pinkas, D.M. et al., PanDDA analysis group deposition of models with modelled events (e.g. bound ligands). To Be Published

Release Date

2018-12-19

Peptides

Protein FAM83B: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

Protein FAM83B

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