SMTL ID : 5tcc.6 (6 other biounits)

Complement Factor D inhibited with JH4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.37 Å

Oligo State

monomer

Ligands

1 x J56: (2S)-N-(6-bromopyridin-2-yl)-3-[(1H-indazol-1-yl)acetyl]-1,3-thiazolidine-2-carboxamide(Non-covalent)

J56.1: 19 residues within 4Å: Chain A: H.24, L.25, C.26, H.41, C.42, W.128, G.129, I.130, R.137, C.179, K.180, G.181, S.183, T.198, S.199, G.200, S.201, R.202, C.204 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.130, A:K.180, A:K.180, A:K.180, A:R.202 Hydrogen bonds: A:L.25, A:G.181, A:S.183 Halogen bonds: A:W.128

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Yang, C.Y. et al., Buried Hydrogen Bond Interactions Contribute to the High Potency of Complement Factor D Inhibitors. ACS Med Chem Lett (2016)

Release Date

2016-10-19

Peptides

Complement factor D: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
F

Complement factor D

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