SMTL ID : 6vmk.1 (15 other biounits)

Crystal structure of human Complement Factor D with anti-Factor D Fab 20D12

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.01 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.1: 6 residues within 4Å: Chain A: L.25, C.26, H.41, G.181, S.183, G.200 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:G.181, A:S.183 Water bridges: A:R.137

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: R.5, E.6, E.8, R.12, H.143 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:E.6, A:E.8, A:R.12 Salt bridges: A:R.5, A:H.143

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dion, M. et al., Crystal structure of human Complement Factor D with anti-Factor D Fab 20D12. To Be Published

Release Date

2021-02-03

Peptides

Complement factor D: A
Fab Y49R light chain: B
Fab Y49R heavy chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
W

B
L

C
M

Complement factor D

Fab Y49R light chain

Fab Y49R heavy chain

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