SMTL ID : 5tyh.1

PglD from Campylobacter jejuni NCTC 11168 in complex with 5-(2-furanyl)-1H-pyrazole-3-carboxylic acid

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.10 Å

Oligo State

homo-trimer

Ligands

6 x 7O4: 3-(furan-2-yl)-1H-pyrazole-5-carboxylic acid(Non-covalent)

7O4.1: 10 residues within 4Å: Chain A: N.121, H.137, S.139, V.140, F.155, G.157, I.158, G.176 Chain B: E.127, P.164 7 PLIP interactions: 6 interactions with chain A, 1 interactions with chain B Hydrophobic interactions: A:F.155, A:I.158 Hydrogen bonds: A:N.121, A:V.140 Salt bridges: A:H.137 pi-Stacking: A:F.155 Water bridges: B:E.127 7O4.2: 10 residues within 4Å: Chain A: L.87, I.88, S.89, V.107, I.108, N.109 Chain C: D.24, N.28, H.83, P.104 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain A Hydrogen bonds: C:N.28 Water bridges: C:N.28, A:I.88 Hydrophobic interactions: A:V.107 7O4.3: 10 residues within 4Å: Chain B: N.121, H.137, S.139, V.140, F.155, G.157, I.158, G.176 Chain C: E.127, P.164 7 PLIP interactions: 6 interactions with chain B, 1 interactions with chain C Hydrophobic interactions: B:F.155, B:I.158 Hydrogen bonds: B:N.121, B:V.140 Salt bridges: B:H.137 pi-Stacking: B:F.155 Water bridges: C:E.127 7O4.4: 10 residues within 4Å: Chain A: D.24, N.28, H.83, P.104 Chain B: L.87, I.88, S.89, V.107, I.108, N.109 4 PLIP interactions: 2 interactions with chain B, 2 interactions with chain A Hydrophobic interactions: B:V.107 Water bridges: B:I.88, A:N.28 Hydrogen bonds: A:N.28 7O4.5: 10 residues within 4Å: Chain A: E.127, P.164 Chain C: N.121, H.137, S.139, V.140, F.155, G.157, I.158, G.176 7 PLIP interactions: 6 interactions with chain C, 1 interactions with chain A Hydrophobic interactions: C:F.155, C:I.158 Hydrogen bonds: C:N.121, C:V.140 Salt bridges: C:H.137 pi-Stacking: C:F.155 Water bridges: A:E.127 7O4.6: 10 residues within 4Å: Chain B: D.24, N.28, H.83, P.104 Chain C: L.87, I.88, S.89, V.107, I.108, N.109 4 PLIP interactions: 2 interactions with chain C, 2 interactions with chain B Hydrophobic interactions: C:V.107 Water bridges: C:I.88, B:N.28 Hydrogen bonds: B:N.28

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

De Schutter, J.W. et al., Targeting Bacillosamine Biosynthesis in Bacterial Pathogens: Development of Inhibitors to a Bacterial Amino-Sugar Acetyltransferase from Campylobacter jejuni. J. Med. Chem. (2017)

Release Date

2017-04-12

Peptides

UDP-N-acetylbacillosamine N-acetyltransferase: ABC

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
A

C
A

UDP-N-acetylbacillosamine N-acetyltransferase

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