SMTL ID : 5tzu.1

Crystal structure of human CD47 ECD bound to Fab of B6H12.2

Coordinates
PDB Format
Method
X-RAY DIFFRACTION 2.10 Å
Oligo State
hetero-1-1-1-mer
Ligands
1 x NAG- NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x NAG- NAG- BMA- MAN- MAN: alpha-D-mannopyranose-(1-3)-[alpha-D-mannopyranose-(1-6)]beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
1 x NAG- NAG- BMA: beta-D-mannopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose-(1-4)-2-acetamido-2-deoxy-beta-D-glucopyranose
2 x SO4: SULFATE ION(Non-functional Binders)
3 x ACT: ACETATE ION(Non-functional Binders)
2 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)
1 x GOL: GLYCEROL(Non-functional Binders)
Links
RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP
Citation
Pietsch, E.C. et al., Anti-leukemic activity and tolerability of anti-human CD47 monoclonal antibodies. Blood Cancer J (2017)
Release Date
2017-03-15
Peptides
Light Chain of Fab B6H12.2: A
Heavy Chain of Fab B6H12.2: B
Leukocyte surface antigen CD47: C
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
A
L
B
H
C
C

Light Chain of Fab B6H12.2

Heavy Chain of Fab B6H12.2

Leukocyte surface antigen CD47

Related Entries With Identical Sequence

5tz2.1 | 5tzt.1 | 5tzt.2 | 8rp8.1 | 8rp8.2