SMTL ID : 5ur9.2 (7 other biounits)

Enantiomer-Specific Binding of the Potent Antinociceptive Agent SBFI-26 to Anandamide transporters FABP5

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.20 Å

Oligo State

monomer

Ligands

1 x 8KS: (1S,2S,3S,4S)-3-{[(naphthalen-1-yl)oxy]carbonyl}-2,4-diphenylcyclobutane-1-carboxylic acid(Non-covalent)

8KS.1: 11 residues within 4Å: Chain A: L.35, M.38, A.42, T.59, S.61, K.64, T.65, T.66, A.81, D.82 Ligands: MYR.4 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:L.35, A:L.35, A:A.42, A:T.59, A:K.64, A:K.64, A:T.66 Salt bridges: A:K.64 pi-Cation interactions: A:K.64

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.19, K.20, G.21, F.22, D.23 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.19, A:G.21, A:F.22, A:D.23 Water bridges: A:E.24 SO4.3: 2 residues within 4Å: Chain A: K.27, R.36 2 PLIP interactions: 2 interactions with chain A Salt bridges: A:K.27, A:R.36

1 x MYR: MYRISTIC ACID(Non-covalent)

MYR.4: 19 residues within 4Å: Chain A: F.22, Y.25, M.26, L.29, V.31, L.35, G.39, P.44, T.59, A.81, D.82, R.84, I.110, R.112, V.121, C.123, R.132, Y.134 Ligands: 8KS.1 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:F.22, A:F.22, A:L.29, A:A.81, A:D.82 Hydrogen bonds: A:R.112 Water bridges: A:Y.134, A:Y.134 Salt bridges: A:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Hsu, H.C. et al., The Antinociceptive Agent SBFI-26 Binds to Anandamide Transporters FABP5 and FABP7 at Two Different Sites. Biochemistry (2017)

Release Date

2017-08-23

Peptides

Fatty acid-binding protein, epidermal: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Fatty acid-binding protein, epidermal

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