SMTL ID : 7g04.2 (1 other biounit)

Crystal Structure of human FABP5 in complex with 7-(4-chlorophenyl)-1,2,3,4-tetrahydronaphthalene-1-carboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.40 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 4 residues within 4Å: Chain A: T.109, T.111, E.122, V.124 No protein-ligand interaction detected (PLIP)

1 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.19, K.20, G.21, F.22, D.23 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.19, A:G.21, A:F.22, A:D.23 Water bridges: A:E.24

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.3: 2 residues within 4Å: Chain A: F.76, E.77 Ligand excluded by PLIP

1 x WXZ: (1R)-7-(4-chlorophenyl)-1,2,3,4-tetrahydronaphthalene-1-carboxylic acid(Non-covalent)

WXZ.4: 13 residues within 4Å: Chain A: F.22, Y.25, M.26, L.29, L.35, M.38, G.39, A.42, P.44, S.61, K.64, A.81, D.82 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:Y.25, A:L.29, A:L.35, A:L.35, A:P.44, A:K.64, A:A.81, A:D.82 Water bridges: A:T.59, A:R.112 pi-Stacking: A:F.22 Halogen bonds: A:S.61

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP5 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Fatty acid-binding protein 5

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