SMTL ID : 7g1q.1

Crystal Structure of human FABP5 in complex with (1S,2R)-2-[(5-carbamoyl-3-ethoxycarbonyl-4-methyl-2-thienyl)carbamoyl]cyclohexanecarboxylic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.24 Å

Oligo State

monomer

Ligands

1 x DMS: DIMETHYL SULFOXIDE(Non-functional Binders)

DMS.1: 4 residues within 4Å: Chain A: T.109, T.111, E.122, V.124 No protein-ligand interaction detected (PLIP)

2 x SO4: SULFATE ION(Non-functional Binders)

SO4.2: 5 residues within 4Å: Chain A: S.19, K.20, G.21, F.22, D.23 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.19, A:G.21, A:F.22, A:D.23 Water bridges: A:E.24 SO4.3: 3 residues within 4Å: Chain A: D.23, K.27, R.36 3 PLIP interactions: 3 interactions with chain A Water bridges: A:R.36 Salt bridges: A:K.27, A:R.36

1 x IOV: (1R,2S)-2-{[5-carbamoyl-3-(ethoxycarbonyl)-4-methylthiophen-2-yl]carbamoyl}cyclohexane-1-carboxylic acid(Non-covalent)

IOV.4: 17 residues within 4Å: Chain A: F.22, M.26, L.35, G.39, A.42, P.44, T.59, S.61, K.64, A.81, D.82, I.110, R.112, V.121, C.123, R.132, Y.134 18 PLIP interactions: 18 interactions with chain A Hydrophobic interactions: A:F.22, A:K.64, A:A.81, A:D.82, A:I.110, A:I.110, A:V.121 Hydrogen bonds: A:T.59, A:T.59, A:S.61, A:K.64 Water bridges: A:D.82, A:R.112, A:R.112, A:R.112, A:Y.134, A:Y.134 Salt bridges: A:R.132

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Obst, U. et al., Crystal Structure of a human FABP5 complex. To be published

Release Date

2023-06-14

Peptides

Fatty acid-binding protein 5: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Fatty acid-binding protein 5

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