SMTL ID : 5vl1.3 (5 other biounits)

Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.70 Å

Oligo State

monomer

Ligands

1 x PGE: TRIETHYLENE GLYCOL(Non-functional Binders)

PGE.1: 9 residues within 4Å: Chain A: T.270, H.271, S.272, F.275, E.423, L.424, G.477, R.482 Ligands: LYS.2 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:S.272, A:S.272, A:E.423, A:E.423, A:R.482

1 x LYS: LYSINE(Non-covalent)

LYS.2: 15 residues within 4Å: Chain A: G.217, A.218, A.239, E.241, R.263, M.277, E.279, Y.281, T.426, Y.428, E.430, G.475, T.476, G.477 Ligands: PGE.1 4 PLIP interactions: 4 interactions with chain A, Hydrophobic interactions: A:T.426 Hydrogen bonds: A:G.217, A:Y.281 Salt bridges: A:R.263

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Dranow, D.M. et al., Crystal Structure of Lysyl-tRNA Synthetase from Mycobacterium ulcerans complexed with L-lysine. to be published

Release Date

2017-05-10

Peptides

Lysine--tRNA ligase: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Lysine--tRNA ligase

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