SMTL ID : 5vph.1

CRYSTAL STRUCTURE OF DER P 1 COMPLEXED WITH FAB 4C1

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.50 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x CA: CALCIUM ION(Non-covalent)

CA.1: 5 residues within 4Å: Chain A: D.56, L.57, E.59, E.91 Ligands: EDO.2 5 PLIP interactions: 4 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:D.56, A:L.57, A:E.59, A:E.91, H2O.2

1 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.2: 7 residues within 4Å: Chain A: R.26, M.27, F.37, D.56, E.59, E.91 Ligands: CA.1 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:M.27, A:E.59 Water bridges: A:R.26

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chruszcz, M. et al., Molecular Determinants For Antibody Binding On Group 1 House Dust Mite Allergens. J.Biol.Chem. (2012)

Release Date

2017-05-24

Peptides

Der p 1 allergen: A
FAB 4C1 - LIGHT CHAIN: B
FAB 4C1 - HEAVY CHAIN: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
C

C
D

Der p 1 allergen

FAB 4C1 - LIGHT CHAIN

FAB 4C1 - HEAVY CHAIN

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