SMTL ID : 5w4r.1

Structure of RORgt bound to a tertiary alcohol

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.00 Å

Oligo State

homo-dimer

Ligands

2 x 9WD: 1-{4-[(R)-(4-chloro-2-methoxy-3-{[4-(1H-pyrazol-1-yl)phenyl]methyl}quinolin-6-yl)(hydroxy)(1-methyl-1H-imidazol-5-yl)methyl]piperidin-1-yl}ethan-1-one(Non-covalent)

9WD.1: 19 residues within 4Å: Chain A: Q.22, L.23, C.56, H.59, M.94, M.101, A.104, V.112, F.113, F.114, E.115, G.116, F.124, L.132, I.133, I.136, F.137, L.211, Q.214 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:L.23, A:V.112, A:F.114, A:F.124, A:I.136 Hydrogen bonds: A:E.115, A:G.116 9WD.2: 22 residues within 4Å: Chain B: Q.22, C.56, H.59, L.60, A.63, M.94, L.98, M.101, A.104, V.112, F.113, F.114, E.115, G.116, F.124, L.132, I.133, I.136, F.137, L.211, Q.214, H.215 10 PLIP interactions: 10 interactions with chain B Hydrophobic interactions: B:L.60, B:L.60, B:A.104, B:V.112, B:F.124, B:L.132, B:I.136, B:H.215 Hydrogen bonds: B:E.115, B:G.116

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Barbay, J.K. et al., 6-Substituted quinolines as ROR gamma t inverse agonists. Bioorg. Med. Chem. Lett. (2017)

Release Date

2017-12-27

Peptides

Nuclear receptor ROR-gamma: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Nuclear receptor ROR-gamma

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