SMTL ID : 5xak.1

Crystal structure (form II) of thymidylate kinase from Thermus thermophilus HB8

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.50 Å

Oligo State

homo-dimer

Ligands

2 x CL: CHLORIDE ION(Non-functional Binders)

CL.1: 5 residues within 4Å: Chain A: G.13, S.14, G.15, K.16, T.17 Ligand excluded by PLIP CL.4: 5 residues within 4Å: Chain B: G.13, S.14, G.15, K.16, T.17 Ligand excluded by PLIP

6 x CS: CESIUM ION(Non-covalent)

CS.2: 3 residues within 4Å: Chain A: P.170, G.171, F.173 No protein-ligand interaction detected (PLIP) CS.3: 2 residues within 4Å: Chain A: A.178, L.180 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:L.180 CS.5: 1 residues within 4Å: Chain B: R.120 No protein-ligand interaction detected (PLIP) CS.6: 6 residues within 4Å: Chain B: Y.62, S.66, R.69, L.93, A.115, A.118 No protein-ligand interaction detected (PLIP) CS.7: 2 residues within 4Å: Chain B: A.178, L.180 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:L.180 CS.8: 4 residues within 4Å: Chain B: P.170, G.171, F.173, V.174 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Chaudhary, S.K. et al., Structural and functional roles of dynamically correlated residues in thymidylate kinase. Acta Crystallogr D Struct Biol (2018)

Release Date

2018-03-14

Peptides

Thymidylate kinase: AB

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Thymidylate kinase

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