SMTL ID : 5ycp.1

Human PPARgamma ligand binding domain complexed with Rosiglitazone

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.00 Å

Oligo State

hetero-1-1-mer

Ligands

1 x BRL: 2,4-THIAZOLIDIINEDIONE, 5-[[4-[2-(METHYL-2-PYRIDINYLAMINO)ETHOXY]PHENYL]METHYL]-(9CL)(Non-covalent)

BRL.1: 16 residues within 4Å: Chain A: I.87, F.88, G.90, C.91, S.95, H.129, Y.133, L.136, V.145, I.147, M.154, M.170, H.255, L.259, L.275, Y.279 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:Y.133, A:L.136 Hydrogen bonds: A:S.95, A:Y.279 Water bridges: A:S.148

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jang, J.Y. et al., Structural Basis for the Enhanced Anti-Diabetic Efficacy of Lobeglitazone on PPAR gamma. Sci Rep (2018)

Release Date

2018-09-12

Peptides

Peroxisome proliferator-activated receptor gamma: A
Nuclear receptor coactivator 1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Peroxisome proliferator-activated receptor gamma

Nuclear receptor coactivator 1

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