SMTL ID : 5zno.2 (1 other biounit)

Crystal structure of PET-degrading cutinase Cut190 S176A/S226P/R228S/ mutant in Ca(2+)-bound state

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.60 Å

Oligo State

monomer

Ligands

4 x CA: CALCIUM ION(Non-covalent)(Non-functional Binders)

CA.1: 2 residues within 4Å: Chain A: D.162, T.164 5 PLIP interactions: 2 interactions with chain A, 3 Ligand-Water interactions Metal complexes: A:D.162, A:D.162, H2O.6, H2O.9, H2O.10 CA.2: 3 residues within 4Å: Chain A: E.178, D.208, E.254 5 PLIP interactions: 3 interactions with chain A, 2 Ligand-Water interactions Metal complexes: A:E.178, A:D.208, A:E.254, H2O.3, H2O.10 CA.3: 5 residues within 4Å: Chain A: S.34, F.35, A.36, F.39, N.91 4 PLIP interactions: 3 interactions with chain A, 1 Ligand-Water interactions Metal complexes: A:S.34, A:A.36, A:F.39, H2O.11 CA.4: 0 residues within 4Å: (No contacts) No protein-ligand interaction detected (PLIP)

2 x GOL: GLYCEROL(Non-functional Binders)

GOL.5: 4 residues within 4Å: Chain A: F.64, M.135, W.159, I.182 No protein-ligand interaction detected (PLIP) GOL.6: 4 residues within 4Å: Chain A: P.11, P.24, F.25, E.52 4 PLIP interactions: 4 interactions with chain A Water bridges: A:G.10, A:P.24, A:S.26, A:E.52

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Numoto, N. et al., Structural Dynamics of the PET-Degrading Cutinase-like Enzyme from Saccharomonospora viridis AHK190 in Substrate-Bound States Elucidates the Ca2+-Driven Catalytic Cycle. Biochemistry (2018)

Release Date

2018-09-12

Peptides

Alpha/beta hydrolase family protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Alpha/beta hydrolase family protein

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