SMTL ID : 5zyk.1

Crystal structure of CERT START domain in complex with compound E25

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.55 Å

Oligo State

monomer

Ligands

1 x 9MC: 2-[4-[4-cyclopentyl-3-[(1~{S},2~{R})-2-pyridin-2-ylcyclopropyl]phenyl]phenyl]sulfonylethanol(Non-covalent)

9MC.1: 16 residues within 4Å: Chain A: F.75, E.85, T.87, Q.106, H.108, R.117, Y.121, N.143, I.162, V.164, Y.192, P.198, L.207, V.210, E.214, Y.215 12 PLIP interactions: 12 interactions with chain A Hydrophobic interactions: A:R.117, A:I.162, A:P.198, A:L.207, A:V.210, A:E.214, A:Y.215, A:Y.215 Hydrogen bonds: A:Q.106, A:Q.106, A:Y.121 Water bridges: A:R.81

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Nakao, N. et al., Natural ligand-nonmimetic inhibitors of the lipid-transfer protein CERT. Commun Chem (2019)

Release Date

2019-02-27

Peptides

LIPID-TRANSFER PROTEIN CERT: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

LIPID-TRANSFER PROTEIN CERT

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