SMTL ID : 6a40.1

complex structure of Alginate lyase AlyF-OU02 with G4

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.80 Å

Oligo State

monomer

Ligands

1 x LGU- LGU- LGU- LGU: alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid-(1-4)-alpha-L-gulopyranuronic acid

LGU-LGU-LGU-LGU.1: 25 residues within 4Å: Chain A: R.146, F.147, K.184, L.186, T.210, Q.215, R.248, N.252, S.253, E.255, R.258, D.261, S.262, R.285, E.286, S.289, R.312, H.313, R.336, Y.338, N.362, A.363, N.394, Q.396, L.427 10 PLIP interactions: 10 interactions with chain A Hydrogen bonds: A:R.248, A:R.285, A:R.312, A:N.362, A:Q.396 Water bridges: A:Y.338, A:N.394 Salt bridges: A:R.285, A:R.312, A:R.336

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Lyu, Q. et al., Structural insights into a novel Ca2+-independent PL-6 alginate lyase from Vibrio OU02 identify the possible subsites responsible for product distribution. Biochim Biophys Acta Gen Subj (2019)

Release Date

2019-05-01

Peptides

alginate lyase AlyF-OU02: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

alginate lyase AlyF-OU02

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