SMTL ID : 6adr.2 (3 other biounits)

Anthrax Toxin Receptor 1-bound the Seneca Valley Virus in neutral conditions

Coordinates

PDB Format Compare

Method

ELECTRON MICROSCOPY

Oligo State

hetero-5-5-5-5-5-mer

Ligands

5 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 4 residues within 4Å: Chain E: S.17, S.19, T.83, G.116 3 PLIP interactions: 3 interactions with chain E Metal complexes: E:S.17, E:S.19, E:T.83 MG.2: 4 residues within 4Å: Chain J: S.17, S.19, T.83, G.116 3 PLIP interactions: 3 interactions with chain J Metal complexes: J:S.17, J:S.19, J:T.83 MG.3: 4 residues within 4Å: Chain O: S.17, S.19, T.83, G.116 3 PLIP interactions: 3 interactions with chain O Metal complexes: O:S.17, O:S.19, O:T.83 MG.4: 4 residues within 4Å: Chain T: S.17, S.19, T.83, G.116 3 PLIP interactions: 3 interactions with chain T Metal complexes: T:S.17, T:S.19, T:T.83 MG.5: 4 residues within 4Å: Chain Y: S.17, S.19, T.83, G.116 3 PLIP interactions: 3 interactions with chain Y Metal complexes: Y:S.17, Y:S.19, Y:T.83

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Cao, L. et al., Seneca Valley virus attachment and uncoating mediated by its receptor anthrax toxin receptor 1. Proc. Natl. Acad. Sci. U.S.A. (2018)

Release Date

2019-02-06

Peptides

VP1: AFKPU
VP3: BGLQV
vp2: CHMRW
VP4: DINSX
Anthrax toxin receptor 1: EJOTY

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

F
A

K
A

P
A

U
A

B
C

G
C

L
C

Q
C

V
C

C
B

H
B

M
B

R
B

W
B

D
D

I
D

N
D

S
D

X
D

E
R

J
R

O
R

T
R

Y
R

VP1

VP3

vp2

VP4

Anthrax toxin receptor 1

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