SMTL ID : 6awt.1 (3 other biounits)

Structure of PR 10 Allergen in complex with epicatechin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.30 Å

Oligo State

monomer

Ligands

2 x 28E: (2R,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol(Non-covalent)

28E.1: 12 residues within 4Å: Chain A: A.25, D.26, T.29, I.33, V.36, V.39, L.54, I.56, H.67, Y.81, G.140, L.141 13 PLIP interactions: 13 interactions with chain A Hydrophobic interactions: A:T.29, A:I.33, A:I.33, A:V.36, A:L.54, A:I.56, A:L.141, A:L.141 Hydrogen bonds: A:T.29, A:T.29 Water bridges: A:H.67, A:Y.79 pi-Stacking: A:H.67 28E.2: 6 residues within 4Å: Chain A: V.42, E.43, I.51, L.66, K.68, V.84 6 PLIP interactions: 6 interactions with chain A Hydrophobic interactions: A:I.51, A:I.51, A:L.66 Hydrogen bonds: A:E.43, A:E.43, A:K.68

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: P.30, I.33, D.34, V.36 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:D.34, A:V.36

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Offermann, L.R. et al., Structure of PR-10 Allergen Ara h 8.01. To Be Published

Release Date

2018-09-12

Peptides

PR 10 protein: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

PR 10 protein

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