SMTL ID : 6awu.2 (3 other biounits)

Structure of PR 10 Allergen Ara h 8.01 in complex with caffeic acid

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 3.05 Å

Oligo State

monomer

Ligands

2 x DHC: CAFFEIC ACID(Non-covalent)

DHC.1: 8 residues within 4Å: Chain A: D.26, T.29, V.36, L.54, H.67, Y.81, K.137, L.141 5 PLIP interactions: 5 interactions with chain A Hydrophobic interactions: A:T.29, A:V.36, A:L.54 Hydrogen bonds: A:D.26, A:Y.81 DHC.2: 14 residues within 4Å: Chain A: D.7, E.8, I.9, M.22, T.100, K.101, L.102, G.112, K.113, L.114, G.138, E.139, L.141, F.142 7 PLIP interactions: 7 interactions with chain A Hydrophobic interactions: A:I.9, A:T.100, A:L.102, A:L.114 Hydrogen bonds: A:T.100, A:G.138 pi-Stacking: A:F.142

1 x NA: SODIUM ION(Non-functional Binders)

NA.3: 4 residues within 4Å: Chain A: P.30, I.33, D.34, V.36 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:I.33

1 x CL: CHLORIDE ION(Non-functional Binders)

CL.4: 3 residues within 4Å: Chain A: H.67, V.83, K.137 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Offermann, L.R. et al., Structure of PR-10 Allergen Ara h 8.01. To Be Published

Release Date

2018-09-12

Peptides

Ara h 8 allergen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
B

Ara h 8 allergen

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