SMTL ID : 6awv.3 (2 other biounits)

Ara h 8.01 in complex with epicatechin

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.55 Å

Oligo State

monomer

Ligands

1 x NA: SODIUM ION(Non-functional Binders)

NA.1: 4 residues within 4Å: Chain A: P.30, I.33, D.34, V.36 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:P.30

2 x 28E: (2R,3R)-2-(3,4-dihydroxyphenyl)-3,4-dihydro-2H-chromene-3,5,7-triol(Non-covalent)

28E.2: 7 residues within 4Å: Chain A: T.29, I.33, V.36, L.54, H.67, K.137, L.141 4 PLIP interactions: 4 interactions with chain A Hydrophobic interactions: A:L.54, A:K.137, A:L.141 Hydrogen bonds: A:T.29 28E.3: 13 residues within 4Å: Chain A: D.7, E.8, I.9, M.22, Y.79, Y.81, T.100, G.112, L.114, K.135, G.138, E.139, L.141 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:I.9, A:T.100, A:L.141 Hydrogen bonds: A:E.8, A:Y.81, A:Y.81, A:L.114, A:K.135

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Offermann, L.R. et al., Structure of PR-10 Allergen Ara h 8.01. To Be Published

Release Date

2018-09-12

Peptides

Ara h 8 allergen: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
C

Ara h 8 allergen

Related Entries With Identical Sequence