SMTL ID : 6b8j.1

Co-structure of human glycogen synthase kinase beta with a selective (5-imidazol-2-yl-4-phenylpyrimidin-2-yl)[2-(2-pyridylamino)ethyl]amine inhibitor

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.60 Å

Oligo State

monomer

Ligands

1 x VAL- SEP- ARG- ARG: VAL-SEP-ARG-ARG(Non-covalent)

VAL-SEP-ARG-ARG.1: 12 residues within 4Å: Chain A: R.92, F.93, K.94, R.96, R.180, K.205, P.212, N.213, V.214, Y.216, I.217, Y.234 9 PLIP interactions: 9 interactions with chain A Hydrophobic interactions: A:I.217 Hydrogen bonds: A:R.92, A:K.94, A:V.214, A:Y.234, A:Y.234 Salt bridges: A:R.96, A:R.180, A:K.205

1 x GOL: GLYCEROL(Non-functional Binders)

GOL.2: 2 residues within 4Å: Chain A: S.174, G.176 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:S.174, A:Q.206

1 x 65C: CHIR99021(Non-covalent)

65C.3: 17 residues within 4Å: Chain A: I.62, G.63, N.64, F.67, V.70, A.83, L.132, D.133, Y.134, V.135, P.136, T.138, R.141, Q.185, L.188, C.199, D.200 11 PLIP interactions: 11 interactions with chain A Hydrophobic interactions: A:F.67, A:V.70, A:A.83, A:L.188, A:L.188 Hydrogen bonds: A:V.135, A:V.135 Water bridges: A:P.136, A:R.141, A:R.141, A:D.200

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Wagman, A.S. et al., Synthesis, Binding Mode, and Antihyperglycemic Activity of Potent and Selective (5-Imidazol-2-yl-4-phenylpyrimidin-2-yl)[2-(2-pyridylamino)ethyl]amine Inhibitors of Glycogen Synthase Kinase 3. J. Med. Chem. (2017)

Release Date

2017-11-08

Peptides

Glycogen synthase kinase-3 beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycogen synthase kinase-3 beta

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