SMTL ID : 6v6l.1

Co-structure of human glycogen synthase kinase beta with 1-(6-((2-((6-amino-5-nitropyridin-2-yl)amino)ethyl)amino)-2-(2,4-dichlorophenyl)pyridin-3-yl)-4-methylpiperazin-2-one

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.19 Å

Oligo State

monomer

Ligands

1 x QQA: 1-(6-((2-((6-amino-5-nitropyridin-2-yl)amino)ethyl)amino)-2-(2,4-dichlorophenyl)pyridin-3-yl)-4-methylpiperazin-2-one(Non-covalent)

QQA.1: 19 residues within 4Å: Chain A: I.62, G.63, N.64, F.67, V.70, A.83, V.110, L.132, D.133, Y.134, V.135, P.136, E.137, T.138, R.141, Q.185, L.188, C.199, D.200 8 PLIP interactions: 8 interactions with chain A Hydrophobic interactions: A:F.67, A:V.70, A:V.70, A:L.188 Hydrogen bonds: A:D.133, A:V.135, A:V.135, A:P.136

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.2: 5 residues within 4Å: Chain A: R.96, R.180, K.205, N.213, V.214 5 PLIP interactions: 5 interactions with chain A Hydrogen bonds: A:N.213, A:V.214 Salt bridges: A:R.96, A:R.180, A:K.205

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Ramurthy, S. et al., Discovery and optimization of novel pyridines as highly potent and selective glycogen synthase kinase 3 inhibitors. Bioorg.Med.Chem.Lett. (2020)

Release Date

2020-01-15

Peptides

Glycogen synthase kinase-3 beta: A

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

Glycogen synthase kinase-3 beta

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