SMTL ID : 6bgr.1

Caspase-3 Mutant - S150E

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 2.16 Å

Oligo State

hetero-1-1-mer

Ligands

1 x ACE- ASP- GLU- VAL- ASP- 0QE: Ac-Asp-Glu-Val-Asp-CMK(Non-covalent)

ACE-ASP-GLU-VAL-ASP-0QE.1: 17 residues within 4Å: Chain A: R.64, S.120, H.121, G.122, Q.161, A.162, C.163 Chain B: Y.29, S.30, W.31, R.32, N.33, S.34, W.39, E.73, S.74, F.75 20 PLIP interactions: 4 interactions with chain A, 16 interactions with chain B Hydrogen bonds: A:Q.161, A:C.163, B:S.30, B:R.32, B:R.32, B:R.32, B:N.33, B:S.34, B:F.75, B:F.75 Salt bridges: A:R.64, A:H.121, B:R.32, B:R.32 Hydrophobic interactions: B:Y.29, B:Y.29, B:W.31, B:W.31 Water bridges: B:F.75, B:F.75

4 x AZI: AZIDE ION(Non-covalent)

AZI.2: 5 residues within 4Å: Chain A: K.38, S.112, G.153, K.154, P.155 3 PLIP interactions: 3 interactions with chain A Hydrogen bonds: A:K.38, A:K.38, A:G.153 AZI.3: 4 residues within 4Å: Chain A: E.123, E.124, R.164, G.165 3 PLIP interactions: 2 interactions with chain A, 1 interactions with chain B Hydrogen bonds: A:E.124 Water bridges: A:T.166, B:G.27 AZI.4: 3 residues within 4Å: Chain A: T.92, E.94, E.95 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:E.94 AZI.5: 3 residues within 4Å: Chain B: A.46, M.47, Q.50 2 PLIP interactions: 2 interactions with chain B Hydrogen bonds: B:A.46, B:Q.50

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Thomas, M.E. et al., Modifications to a common phosphorylation network provide individualized control in caspases. J. Biol. Chem. (2018)

Release Date

2018-02-21

Peptides

Caspase-3: A
Caspase-3: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Caspase-3

Caspase-3

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