- Coordinates
- PDB Format
- Method
- ELECTRON MICROSCOPY
- Oligo State
- hetero-5-1-1-mer
- Ligands
- 1 x ALA- 2TL- DCY- HYP- ALA- TRP- EEP: Phalloidin(Non-covalent)
ALA-2TL-DCY-HYP-ALA-TRP-EEP.1: 14 residues within 4Å:- Chain B: I.287
- Chain C: E.72, I.75, T.77, L.110, P.112, R.177, D.179
- Chain D: T.194, G.197, Y.198, S.199, E.205, L.242
13 PLIP interactions:6 interactions with chain C, 7 interactions with chain D- Hydrophobic interactions: C:I.75, C:I.75, C:T.77, C:P.112, D:T.194, D:Y.198, D:Y.198, D:L.242
- Hydrogen bonds: C:R.177, C:D.179, D:G.197, D:S.199, D:S.199
- 6 x ADP: ADENOSINE-5'-DIPHOSPHATE(Non-covalent)
ADP.2: 17 residues within 4Å:- Chain A: G.13, S.14, G.15, L.16, K.18, G.156, D.157, G.182, R.210, K.213, E.214, G.302, T.303, M.305, Y.306, K.336
- Ligands: MG.3
14 PLIP interactions:14 interactions with chain A- Hydrogen bonds: A:G.13, A:S.14, A:G.15, A:L.16, A:D.157, A:D.157, A:K.213, A:G.302, A:T.303, A:K.336, A:K.336
- Salt bridges: A:K.18, A:K.18
- pi-Stacking: A:Y.306
ADP.4: 17 residues within 4Å:- Chain B: G.13, S.14, G.15, L.16, K.18, G.156, D.157, G.182, R.210, K.213, E.214, G.302, T.303, M.305, Y.306, K.336
- Ligands: MG.5
16 PLIP interactions:16 interactions with chain B- Hydrogen bonds: B:G.13, B:S.14, B:G.15, B:L.16, B:L.16, B:D.157, B:D.157, B:K.213, B:E.214, B:G.302, B:T.303, B:K.336, B:K.336
- Salt bridges: B:K.18, B:K.18
- pi-Stacking: B:Y.306
ADP.6: 17 residues within 4Å:- Chain C: G.13, S.14, G.15, L.16, K.18, G.156, D.157, G.182, R.210, K.213, E.214, G.302, T.303, M.305, Y.306, K.336
- Ligands: MG.7
15 PLIP interactions:15 interactions with chain C- Hydrogen bonds: C:G.13, C:S.14, C:G.15, C:L.16, C:D.157, C:D.157, C:K.213, C:E.214, C:G.302, C:T.303, C:K.336, C:K.336
- Salt bridges: C:K.18, C:K.18
- pi-Stacking: C:Y.306
ADP.8: 16 residues within 4Å:- Chain D: G.13, S.14, G.15, L.16, K.18, G.156, D.157, G.182, R.210, K.213, E.214, G.302, T.303, M.305, K.336
- Ligands: MG.9
14 PLIP interactions:14 interactions with chain D- Hydrogen bonds: D:G.13, D:S.14, D:G.15, D:L.16, D:D.157, D:D.157, D:K.213, D:E.214, D:G.302, D:T.303, D:K.336
- Salt bridges: D:K.18, D:K.18
- pi-Stacking: D:Y.306
ADP.10: 15 residues within 4Å:- Chain E: G.13, S.14, G.15, L.16, K.18, G.156, D.157, R.210, K.213, E.214, G.302, T.303, M.305, K.336
- Ligands: MG.11
15 PLIP interactions:15 interactions with chain E- Hydrogen bonds: E:G.13, E:S.14, E:G.15, E:L.16, E:D.157, E:D.157, E:K.213, E:E.214, E:G.302, E:T.303, E:K.336, E:K.336
- Salt bridges: E:K.18, E:K.18
- pi-Stacking: E:Y.306
ADP.13: 15 residues within 4Å:- Chain F: N.51, P.52, R.54, Y.59, E.104, S.105, G.106, A.107, G.108, K.109, T.110, E.111, N.155, N.157
- Ligands: MG.12
11 PLIP interactions:11 interactions with chain F- Hydrogen bonds: F:N.51, F:Y.59, F:Y.59, F:G.106, F:A.107, F:G.108, F:K.109, F:T.110, F:E.111, F:N.155
- Salt bridges: F:K.109
- 6 x MG: MAGNESIUM ION(Non-covalent)
MG.3: 3 residues within 4Å:- Chain A: Q.137, G.156
- Ligands: ADP.2
No protein-ligand interaction detected (PLIP)MG.5: 4 residues within 4Å:- Chain B: Q.137, G.156, V.339
- Ligands: ADP.4
No protein-ligand interaction detected (PLIP)MG.7: 3 residues within 4Å:- Chain C: Q.137, V.339
- Ligands: ADP.6
No protein-ligand interaction detected (PLIP)MG.9: 3 residues within 4Å:- Chain D: Q.137, V.339
- Ligands: ADP.8
No protein-ligand interaction detected (PLIP)MG.11: 3 residues within 4Å:- Chain E: Q.137, V.339
- Ligands: ADP.10
No protein-ligand interaction detected (PLIP)MG.12: 4 residues within 4Å:- Chain F: T.110, E.145, S.159
- Ligands: ADP.13
1 PLIP interactions:1 interactions with chain F- Metal complexes: F:T.110
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Mentes, A. et al., High-resolution cryo-EM structures of actin-bound myosin states reveal the mechanism of myosin force sensing. Proc. Natl. Acad. Sci. U.S.A. (2018)
- Release Date
- 2018-01-31
- Peptides
- Actin, alpha skeletal muscle: ABCDE
Unconventional myosin-Ib: F
Calmodulin: G - SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
BC
CD
DE
EF
PG
R
SMTL ID : 6c1d.1
High-Resolution Cryo-EM Structures of Actin-bound Myosin States Reveal the Mechanism of Myosin Force Sensing
Actin, alpha skeletal muscle
Toggle Identical (ABCDE)Unconventional myosin-Ib
Calmodulin
Related Entries With Identical Sequence
1a29.1 | 1cfc.1 | 1cfd.1 | 1cff.1 | 1ckk.1 | 1cll.1 | 1cm1.1 | 1cm1.2 | 1cm4.1 | 1ctr.1 | 1g4y.1 | 1h1v.1 | 1iwq.1 | 1iwq.2 | 1j6z.1 | 1k90.1 | 1k90.2 | 1k90.3 | 1k90.4 | 1kxp.1 | 1l7z.1 | 1lin.1 | 1lot.1 | 1m8q.1 | 1ma9.1 | 1mux.1 | 1mvw.1 | 1niw.1 | 1niw.2 | 1niw.3 more...less...1niw.4 | 1niw.5 | 1niw.6 | 1niw.7 | 1niw.8 | 1nwd.1 | 1nwk.1 | 1o18.1 | 1o19.1 | 1o1a.1 | 1o1b.1 | 1o1c.1 | 1o1d.1 | 1o1e.1 | 1o1f.1 | 1o1g.1 | 1qiv.1 | 1qiw.1 | 1qiw.2 | 1qx5.1 | 1qx5.2 | 1qx5.3 | 1qx5.4 | 1qx7.1 | 1qx7.2 | 1qx7.3 | 1qx7.4 | 1qz5.1 | 1qz6.1 | 1rdw.1 | 1rfq.1 | 1s22.1 | 1s26.1 | 1s26.2 | 1s26.3 | 1sk6.1 | 1sk6.2 | 1sk6.3 | 1sy9.1 | 1up5.1 | 1up5.2 | 1wua.1 | 1x02.1 | 1xa5.1 | 1y64.1 | 1yr5.1 | 1yxq.1 | 2a3z.1 | 2a40.1 | 2a40.2 | 2a40.3 | 2a41.1 | 2a42.1 | 2a5x.1 | 2asm.1 | 2aso.1 | 2asp.1 | 2bcx.1 | 2d1k.1 | 2dfs.1 | 2f3y.1 | 2f3z.1 | 2ff3.1 | 2ff6.1 | 2fot.1 | 2fxu.1 | 2hmp.1 | 2hqw.1 | 2jzi.1 | 2k0e.1 | 2k0f.1 | 2kdu.1 | 2kne.1 | 2kug.1 | 2l53.1 | 2l7l.1 | 2ll6.1 | 2ll7.1 | 2m0j.1 | 2m0k.1 | 2m55.1 | 2mes.1 | 2mg5.1 | 2mgu.1 | 2n27.1 | 2n8j.1 | 2o5g.1 | 2o60.1 | 2pav.1 | 2q0r.1 | 2q0u.1 | 2q1n.1 | 2q1n.2 | 2q31.1 | 2q31.2 | 2q36.1 | 2q97.1 | 2q97.2 | 2vcp.1 | 2vcp.2 | 2x0g.1 | 2y83.1 | 2zwh.1 | 3buz.1 | 3bxk.1 | 3bxk.2 | 3bxl.1 | 3bxl.2 | 3bya.1 | 3dve.1 | 3dvj.1 | 3dvk.1 | 3dvm.1 | 3g43.1 | 3gof.1 | 3gof.2 | 3hbt.1 | 3if7.1 | 3j4k.1 | 3j8a.1 | 3jbi.1 | 3jbj.1 | 3jbk.1 | 3m1f.1 | 3m3n.1 | 3mfp.1 | 3mfp.2 | 3mfp.3 | 3sjh.1 | 3tpq.1 | 3u8x.1 | 3u8x.2 | 3u9d.1 | 3u9d.2 | 3u9z.1 | 3ue5.1 | 3ue5.2 | 3ue5.3 | 4a7f.1 | 4a7h.1 | 4a7l.1 | 4a7n.1 | 4ehq.1 | 4gy2.1 | 4h03.1 | 4h0t.1 | 4h0v.1 | 4h0x.1 | 4h0y.1 | 4k41.1 | 4k42.1 | 4k42.2 | 4k42.3 | 4k42.4 | 4k43.1 | 4k43.2 | 4lzx.1 | 4m1l.1 | 4pl8.1 | 4r8g.1 | 4upu.1 | 4v0u.6 | 4v0u.7 | 4v0u.8 | 4v0u.9 | 4v0u.10 | 5h53.1 | 5j7j.1 | 5j8h.1 | 5jlf.1 | 5mva.1 | 5mvy.1 | 5onv.1 | 5ooc.1 | 5ood.1 | 5ooe.1 | 5oof.1 | 5t0x.1 | 5yu8.1 | 6but.1 | 6c1g.1 | 6c1h.1 | 6d8c.1 | 6djm.1 | 6djn.1 | 6djo.1 | 6fhl.1 | 6fm2.1 | 6kll.1 | 6kln.1 | 6kn7.1 | 6kn8.1 | 6os4.1 | 6os4.2 | 6pjx.1 | 6rsw.1 | 6t1y.1 | 6t20.1 | 6t23.1 | 6t24.1 | 6t25.1 | 6upv.1 | 6upw.1 | 6yns.1 | 6yns.2 | 6yns.3 | 6yns.4 | 6yns.5 | 6yns.6 | 6ynu.1 | 6ynu.2 | 6yp9.1 | 6zbi.1 | 7c2f.1 | 7c2f.2 | 7k20.1 | 7k21.1 | 7ko4.1 | 7ko5.1 | 7ko7.1 | 7kon.1 | 7kor.1 | 7nxv.1 | 7nxv.2 | 7nzm.1 | 7psz.1 | 7pu9.1 | 7shq.1 | 7t5q.1 | 7zrp.1 | 7zrp.2 | 8a2r.1 | 8a2s.1 | 8a2t.1 | 8a2u.1 | 8a2y.1 | 8a2z.1 | 8bjh.1 | 8bji.1 | 8bjj.1 | 8bo1.1 | 8bo1.2 | 8br0.1 | 8br0.2 | 8br1.1 | 8br1.2 | 8dmx.1 | 8e9b.1 | 8fny.1 | 8fny.2 | 8fo6.1 | 8gm4.1 | 8gm5.1 | 8of8.1 | 8ru0.1 | 8rv2.1 | 8syf.1 | 8uee.1 | 8viz.1 | 8vkh.1 | 9duu.1 | 9dva.1 | 9fjo.1