SMTL ID : 6dc4.1

RSV-neutralizing human antibody AM22

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 1.70 Å

Oligo State

hetero-1-1-mer

Ligands

17 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)

EDO.1: 7 residues within 4Å: Chain A: Y.156, E.159, P.160, V.161, P.178, A.179, L.189 Ligand excluded by PLIP EDO.2: 6 residues within 4Å: Chain A: N.208, V.209, N.210, K.217, V.218, D.219 Ligand excluded by PLIP EDO.3: 9 residues within 4Å: Chain A: K.31, S.33, E.54, G.100, V.101, T.102, G.109, I.110, D.111 Ligand excluded by PLIP EDO.4: 4 residues within 4Å: Chain A: S.131, V.132, V.218 Chain B: E.124 Ligand excluded by PLIP EDO.5: 4 residues within 4Å: Chain A: N.166, A.169, L.170, Q.203 Ligand excluded by PLIP EDO.6: 5 residues within 4Å: Chain A: V.2, Q.3, L.4, Y.113, W.114 Ligand excluded by PLIP EDO.7: 5 residues within 4Å: Chain A: R.67, L.68, T.69, E.82, G.84 Ligand excluded by PLIP EDO.8: 6 residues within 4Å: Chain A: L.152, V.180, S.188, L.189, S.190 Chain B: T.179 Ligand excluded by PLIP EDO.9: 3 residues within 4Å: Chain A: G.107, L.108 Chain B: S.54 Ligand excluded by PLIP EDO.10: 5 residues within 4Å: Chain A: L.108, G.109, I.110 Chain B: F.50 Ligands: EDO.15 Ligand excluded by PLIP EDO.11: 6 residues within 4Å: Chain B: Q.38, R.46, R.62, F.63, E.82, D.83 Ligand excluded by PLIP EDO.12: 6 residues within 4Å: Chain A: L.99, V.101 Chain B: H.33, A.35, S.92, F.97 Ligand excluded by PLIP EDO.13: 6 residues within 4Å: Chain A: G.42, K.43 Chain B: V.86, Y.88, P.101, G.102 Ligand excluded by PLIP EDO.14: 6 residues within 4Å: Chain A: Q.39 Chain B: Q.39, K.40, P.41, V.86, Y.88 Ligand excluded by PLIP EDO.15: 6 residues within 4Å: Chain A: I.110, D.111 Chain B: F.50, A.56, T.57 Ligands: EDO.10 Ligand excluded by PLIP EDO.16: 7 residues within 4Å: Chain B: P.120, Y.187, F.210, N.211, R.212, G.213, E.214 Ligand excluded by PLIP EDO.17: 6 residues within 4Å: Chain B: F.84, F.107, Q.167, D.168, S.169, S.172 Ligand excluded by PLIP

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jones, H.G. et al., Alternative conformations of a major antigenic site on RSV F. Plos Pathog. (2019)

Release Date

2019-07-10

Peptides

Fab AM22 Heavy Chain: A
Fab AM22 Light Chain: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
H

B
L

Fab AM22 Heavy Chain

Fab AM22 Light Chain

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