SMTL ID : 6dc5.3 (2 other biounits)

RSV prefusion F in complex with AM22 Fab

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 3.50 Å

Oligo State

hetero-1-1-1-mer

Ligands

1 x NAG: 2-acetamido-2-deoxy-beta-D-glucopyranose(Post Translational Modification)

NAG.1: 3 residues within 4Å: Chain A: E.66, K.68, N.70 2 PLIP interactions: 2 interactions with chain A Hydrogen bonds: A:E.66, A:K.68

1 x CD: CADMIUM ION(Non-covalent)

CD.2: 3 residues within 4Å: Chain A: G.162, N.165, E.294 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.294

2 x PEG: DI(HYDROXYETHYL)ETHER(Non-functional Binders)

PEG.3: 3 residues within 4Å: Chain C: G.9, Y.88, G.102 1 PLIP interactions: 1 interactions with chain B Hydrogen bonds: B:G.42 PEG.4: 1 residues within 4Å: Chain C: S.68 1 PLIP interactions: 1 interactions with chain C Hydrogen bonds: C:S.68

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Jones, H.G. et al., Alternative conformations of a major antigenic site on RSV F. Plos Pathog. (2019)

Release Date

2019-07-10

Peptides

RSV fusion glycoprotein: A
Fab AM22 heavy chain: B
Fab AM22 light chain: C

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
G

B
H

C
I

RSV fusion glycoprotein

Fab AM22 heavy chain

Fab AM22 light chain

Related Entries With Identical Sequence