- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-trimer
- Ligands
- 27 x SR: STRONTIUM ION(Non-functional Binders)
- 9 x CL: CHLORIDE ION(Non-functional Binders)
CL.10: 8 residues within 4Å:- Chain A: H.515, K.521
- Chain B: H.515, K.521
- Chain C: H.515, K.521
- Ligands: CL.28, CL.46
Ligand excluded by PLIPCL.11: 4 residues within 4Å:- Chain A: R.279, T.310, T.311, R.340
Ligand excluded by PLIPCL.12: 7 residues within 4Å:- Chain A: G.256, V.257, W.346, A.354, G.355, P.356, Y.432
Ligand excluded by PLIPCL.28: 8 residues within 4Å:- Chain A: H.515, K.521
- Chain B: H.515, K.521
- Chain C: H.515, K.521
- Ligands: CL.10, CL.46
Ligand excluded by PLIPCL.29: 4 residues within 4Å:- Chain B: R.279, T.310, T.311, R.340
Ligand excluded by PLIPCL.30: 7 residues within 4Å:- Chain B: G.256, V.257, W.346, A.354, G.355, P.356, Y.432
Ligand excluded by PLIPCL.46: 8 residues within 4Å:- Chain A: H.515, K.521
- Chain B: H.515, K.521
- Chain C: H.515, K.521
- Ligands: CL.10, CL.28
Ligand excluded by PLIPCL.47: 4 residues within 4Å:- Chain C: R.279, T.310, T.311, R.340
Ligand excluded by PLIPCL.48: 7 residues within 4Å:- Chain C: G.256, V.257, W.346, A.354, G.355, P.356, Y.432
Ligand excluded by PLIP- 9 x GOL: GLYCEROL(Non-functional Binders)
GOL.13: 7 residues within 4Å:- Chain A: T.156, Y.182, L.185, Q.187, E.212, N.214, W.243
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Y.182, A:Y.182, A:Q.187, A:W.243
- Water bridges: A:N.214
GOL.14: 7 residues within 4Å:- Chain A: N.242, Y.255, H.283, E.285, Y.317, G.347, V.348
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:Y.255, A:Y.255, A:V.348
- Water bridges: A:N.242, A:N.242
GOL.15: 8 residues within 4Å:- Chain A: N.84, R.105
- Chain C: D.90, K.91, N.92, G.109, T.110, R.130
7 PLIP interactions:5 interactions with chain C, 2 interactions with chain A- Hydrogen bonds: C:T.110, A:N.84
- Water bridges: C:G.109, C:N.128, C:N.128, C:R.130, A:R.105
GOL.31: 7 residues within 4Å:- Chain B: T.156, Y.182, L.185, Q.187, E.212, N.214, W.243
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:Y.182, B:Y.182, B:Q.187, B:W.243
- Water bridges: B:N.214
GOL.32: 7 residues within 4Å:- Chain B: N.242, Y.255, H.283, E.285, Y.317, G.347, V.348
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:Y.255, B:Y.255, B:V.348
- Water bridges: B:N.242, B:N.242
GOL.33: 8 residues within 4Å:- Chain A: D.90, K.91, N.92, G.109, T.110, R.130
- Chain B: N.84, R.105
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:T.110, B:N.84
- Water bridges: A:G.109, A:N.128, A:N.128, A:R.130, B:R.105
GOL.49: 7 residues within 4Å:- Chain C: T.156, Y.182, L.185, Q.187, E.212, N.214, W.243
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:Y.182, C:Y.182, C:Q.187, C:W.243
- Water bridges: C:N.214
GOL.50: 7 residues within 4Å:- Chain C: N.242, Y.255, H.283, E.285, Y.317, G.347, V.348
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:Y.255, C:Y.255, C:V.348
- Water bridges: C:N.242, C:N.242
GOL.51: 8 residues within 4Å:- Chain B: D.90, K.91, N.92, G.109, T.110, R.130
- Chain C: N.84, R.105
7 PLIP interactions:2 interactions with chain C, 5 interactions with chain B- Hydrogen bonds: C:N.84, B:T.110
- Water bridges: C:R.105, B:G.109, B:N.128, B:N.128, B:R.130
- 9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.16: 8 residues within 4Å:- Chain A: V.257, D.258, Q.320, I.358, N.359, W.382, E.383
- Ligands: SR.6
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:D.258, A:D.258, A:N.359
- Water bridges: A:K.288, A:K.288
EDO.17: 10 residues within 4Å:- Chain A: T.462, D.463, R.464, T.476, V.478, R.484, P.486, V.487, L.488
- Chain C: R.506
7 PLIP interactions:6 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:D.463, A:L.488, A:L.488, C:R.506
- Water bridges: A:C.465, A:T.476, A:T.476
EDO.18: 6 residues within 4Å:- Chain A: G.573, A.574, N.575, G.576, V.603, T.604
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:N.575, A:G.576, A:T.604
- Water bridges: A:N.575
EDO.34: 8 residues within 4Å:- Chain B: V.257, D.258, Q.320, I.358, N.359, W.382, E.383
- Ligands: SR.24
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:D.258, B:D.258, B:N.359
- Water bridges: B:K.288, B:K.288
EDO.35: 10 residues within 4Å:- Chain A: R.506
- Chain B: T.462, D.463, R.464, T.476, V.478, R.484, P.486, V.487, L.488
7 PLIP interactions:6 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:D.463, B:L.488, B:L.488, A:R.506
- Water bridges: B:C.465, B:T.476, B:T.476
EDO.36: 6 residues within 4Å:- Chain B: G.573, A.574, N.575, G.576, V.603, T.604
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:N.575, B:G.576, B:T.604
- Water bridges: B:N.575
EDO.52: 8 residues within 4Å:- Chain C: V.257, D.258, Q.320, I.358, N.359, W.382, E.383
- Ligands: SR.42
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:D.258, C:D.258, C:N.359
- Water bridges: C:K.288, C:K.288
EDO.53: 10 residues within 4Å:- Chain B: R.506
- Chain C: T.462, D.463, R.464, T.476, V.478, R.484, P.486, V.487, L.488
7 PLIP interactions:6 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:D.463, C:L.488, C:L.488, B:R.506
- Water bridges: C:C.465, C:T.476, C:T.476
EDO.54: 6 residues within 4Å:- Chain C: G.573, A.574, N.575, G.576, V.603, T.604
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:N.575, C:G.576, C:T.604
- Water bridges: C:N.575
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Browning, C. et al., Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid. To Be Published
- Release Date
- 2019-07-17
- Peptides
- Bacteriophage Phi92 gp150: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-trimer
- Ligands
- 27 x SR: STRONTIUM ION(Non-functional Binders)
- 9 x CL: CHLORIDE ION(Non-functional Binders)
- 9 x GOL: GLYCEROL(Non-functional Binders)
- 9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Browning, C. et al., Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid. To Be Published
- Release Date
- 2019-07-17
- Peptides
- Bacteriophage Phi92 gp150: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
BB
BC
B