- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x BGC- FUC- FUC- GLA- BDP: beta-D-glucopyranuronic acid-(1-3)-alpha-D-galactopyranose-(1-3)-alpha-L-fucopyranose-(1-4)-alpha-L-fucopyranose-(1-3)-beta-D-glucopyranose
- 12 x SO4: SULFATE ION(Non-functional Binders)
SO4.2: 4 residues within 4Å:- Chain A: R.279, S.304, T.305, G.306
4 PLIP interactions:4 interactions with chain A- Hydrogen bonds: A:S.304, A:G.306
- Water bridges: A:R.279
- Salt bridges: A:R.279
SO4.3: 5 residues within 4Å:- Chain A: R.279, L.309, T.310, T.311, R.340
5 PLIP interactions:5 interactions with chain A- Hydrogen bonds: A:L.309, A:T.311, A:T.311
- Salt bridges: A:R.279, A:R.340
SO4.4: 7 residues within 4Å:- Chain A: R.411, R.413, L.448, S.449, G.450
- Chain B: E.383, S.385
7 PLIP interactions:5 interactions with chain A, 2 interactions with chain B- Hydrogen bonds: A:L.448, A:G.450
- Water bridges: A:R.411, B:S.385, B:S.403
- Salt bridges: A:R.411, A:R.413
SO4.5: 7 residues within 4Å:- Chain A: N.242, Q.280, H.283, G.308, L.309, T.310, Y.317
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:N.242, A:Q.280, A:Q.280, A:G.308, A:T.310
- Water bridges: A:T.310, A:Y.317
- Salt bridges: A:H.283
SO4.9: 4 residues within 4Å:- Chain B: R.279, S.304, T.305, G.306
4 PLIP interactions:4 interactions with chain B- Hydrogen bonds: B:S.304, B:G.306
- Water bridges: B:R.279
- Salt bridges: B:R.279
SO4.10: 5 residues within 4Å:- Chain B: R.279, L.309, T.310, T.311, R.340
5 PLIP interactions:5 interactions with chain B- Hydrogen bonds: B:L.309, B:T.311, B:T.311
- Salt bridges: B:R.279, B:R.340
SO4.11: 7 residues within 4Å:- Chain B: R.411, R.413, L.448, S.449, G.450
- Chain C: E.383, S.385
7 PLIP interactions:5 interactions with chain B, 2 interactions with chain C- Hydrogen bonds: B:L.448, B:G.450
- Water bridges: B:R.411, C:S.385, C:S.403
- Salt bridges: B:R.411, B:R.413
SO4.12: 7 residues within 4Å:- Chain B: N.242, Q.280, H.283, G.308, L.309, T.310, Y.317
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:N.242, B:Q.280, B:Q.280, B:G.308, B:T.310
- Water bridges: B:T.310, B:Y.317
- Salt bridges: B:H.283
SO4.16: 4 residues within 4Å:- Chain C: R.279, S.304, T.305, G.306
4 PLIP interactions:4 interactions with chain C- Hydrogen bonds: C:S.304, C:G.306
- Water bridges: C:R.279
- Salt bridges: C:R.279
SO4.17: 5 residues within 4Å:- Chain C: R.279, L.309, T.310, T.311, R.340
5 PLIP interactions:5 interactions with chain C- Hydrogen bonds: C:L.309, C:T.311, C:T.311
- Salt bridges: C:R.279, C:R.340
SO4.18: 7 residues within 4Å:- Chain A: E.383, S.385
- Chain C: R.411, R.413, L.448, S.449, G.450
7 PLIP interactions:5 interactions with chain C, 2 interactions with chain A- Hydrogen bonds: C:L.448, C:G.450
- Water bridges: C:R.411, A:S.385, A:S.403
- Salt bridges: C:R.411, C:R.413
SO4.19: 7 residues within 4Å:- Chain C: N.242, Q.280, H.283, G.308, L.309, T.310, Y.317
8 PLIP interactions:8 interactions with chain C- Hydrogen bonds: C:N.242, C:Q.280, C:Q.280, C:G.308, C:T.310
- Water bridges: C:T.310, C:Y.317
- Salt bridges: C:H.283
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x HLA: 1,5-anhydro-4,6-O-[(1R)-1-carboxyethylidene]-D-galactitol(Non-covalent)
HLA.7: 4 residues within 4Å:- Chain A: S.98, M.118, K.137
- Ligands: BGC-FUC-FUC-GLA-BDP.1
1 PLIP interactions:1 interactions with chain A- Hydrogen bonds: A:S.98
HLA.14: 4 residues within 4Å:- Chain B: S.98, M.118, K.137
- Ligands: BGC-FUC-FUC-GLA-BDP.8
1 PLIP interactions:1 interactions with chain B- Hydrogen bonds: B:S.98
HLA.21: 4 residues within 4Å:- Chain C: S.98, M.118, K.137
- Ligands: BGC-FUC-FUC-GLA-BDP.15
1 PLIP interactions:1 interactions with chain C- Hydrogen bonds: C:S.98
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Browning, C. et al., Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid. To Be Published
- Release Date
- 2019-07-17
- Peptides
- Bacteriophage Phi92 gp150: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.80 Å
- Oligo State
- homo-trimer
- Ligands
- 3 x BGC- FUC- FUC- GLA- BDP: beta-D-glucopyranuronic acid-(1-3)-alpha-D-galactopyranose-(1-3)-alpha-L-fucopyranose-(1-4)-alpha-L-fucopyranose-(1-3)-beta-D-glucopyranose
- 12 x SO4: SULFATE ION(Non-functional Binders)
- 3 x MG: MAGNESIUM ION(Non-covalent)
- 3 x HLA: 1,5-anhydro-4,6-O-[(1R)-1-carboxyethylidene]-D-galactitol(Non-covalent)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Browning, C. et al., Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid. To Be Published
- Release Date
- 2019-07-17
- Peptides
- Bacteriophage Phi92 gp150: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
AB
AC
A