- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-trimer
- Ligands
- 24 x SR: STRONTIUM ION(Non-functional Binders)
- 9 x CL: CHLORIDE ION(Non-functional Binders)
CL.9: 8 residues within 4Å:- Chain A: H.515, K.521
- Chain B: H.515, K.521
- Chain C: H.515, K.521
- Ligands: CL.25, CL.41
Ligand excluded by PLIPCL.10: 7 residues within 4Å:- Chain A: G.256, V.257, W.346, A.354, G.355, P.356, Y.432
Ligand excluded by PLIPCL.11: 4 residues within 4Å:- Chain A: R.279, T.310, T.311, R.340
Ligand excluded by PLIPCL.25: 8 residues within 4Å:- Chain A: H.515, K.521
- Chain B: H.515, K.521
- Chain C: H.515, K.521
- Ligands: CL.9, CL.41
Ligand excluded by PLIPCL.26: 7 residues within 4Å:- Chain B: G.256, V.257, W.346, A.354, G.355, P.356, Y.432
Ligand excluded by PLIPCL.27: 4 residues within 4Å:- Chain B: R.279, T.310, T.311, R.340
Ligand excluded by PLIPCL.41: 8 residues within 4Å:- Chain A: H.515, K.521
- Chain B: H.515, K.521
- Chain C: H.515, K.521
- Ligands: CL.9, CL.25
Ligand excluded by PLIPCL.42: 7 residues within 4Å:- Chain C: G.256, V.257, W.346, A.354, G.355, P.356, Y.432
Ligand excluded by PLIPCL.43: 4 residues within 4Å:- Chain C: R.279, T.310, T.311, R.340
Ligand excluded by PLIP- 6 x GOL: GLYCEROL(Non-functional Binders)
GOL.12: 10 residues within 4Å:- Chain A: T.462, D.463, R.464, T.476, V.478, R.484, P.486, V.487, L.488
- Chain C: R.506
9 PLIP interactions:8 interactions with chain A, 1 interactions with chain C- Hydrogen bonds: A:D.463, A:P.486, A:L.488, A:L.488, C:R.506
- Water bridges: A:T.462, A:C.465, A:T.476, A:T.476
GOL.13: 7 residues within 4Å:- Chain A: N.242, Y.255, H.283, E.285, Y.317, G.347, V.348
8 PLIP interactions:8 interactions with chain A- Hydrogen bonds: A:E.285, A:V.348
- Water bridges: A:N.242, A:N.242, A:Y.255, A:Y.255, A:H.283, A:H.283
GOL.28: 10 residues within 4Å:- Chain A: R.506
- Chain B: T.462, D.463, R.464, T.476, V.478, R.484, P.486, V.487, L.488
9 PLIP interactions:8 interactions with chain B, 1 interactions with chain A- Hydrogen bonds: B:D.463, B:P.486, B:L.488, B:L.488, A:R.506
- Water bridges: B:T.462, B:C.465, B:T.476, B:T.476
GOL.29: 7 residues within 4Å:- Chain B: N.242, Y.255, H.283, E.285, Y.317, G.347, V.348
8 PLIP interactions:8 interactions with chain B- Hydrogen bonds: B:E.285, B:V.348
- Water bridges: B:N.242, B:N.242, B:Y.255, B:Y.255, B:H.283, B:H.283
GOL.44: 10 residues within 4Å:- Chain B: R.506
- Chain C: T.462, D.463, R.464, T.476, V.478, R.484, P.486, V.487, L.488
9 PLIP interactions:8 interactions with chain C, 1 interactions with chain B- Hydrogen bonds: C:D.463, C:P.486, C:L.488, C:L.488, B:R.506
- Water bridges: C:T.462, C:C.465, C:T.476, C:T.476
GOL.45: 7 residues within 4Å:- Chain C: N.242, Y.255, H.283, E.285, Y.317, G.347, V.348
8 PLIP interactions:8 interactions with chain C- Hydrogen bonds: C:E.285, C:V.348
- Water bridges: C:N.242, C:N.242, C:Y.255, C:Y.255, C:H.283, C:H.283
- 9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
EDO.14: 5 residues within 4Å:- Chain A: V.348, G.351, R.352, Y.353
- Ligands: EDO.16
No protein-ligand interaction detected (PLIP)EDO.15: 10 residues within 4Å:- Chain A: E.212, N.214, N.242, I.245, G.248, V.249, A.250, H.283, E.285
- Ligands: SR.6
4 PLIP interactions:4 interactions with chain A- Water bridges: A:E.212, A:N.242, A:N.242, A:H.283
EDO.16: 5 residues within 4Å:- Chain A: G.351, R.352, Y.353, F.431
- Ligands: EDO.14
2 PLIP interactions:2 interactions with chain A- Hydrogen bonds: A:R.352, A:Y.353
EDO.30: 5 residues within 4Å:- Chain B: V.348, G.351, R.352, Y.353
- Ligands: EDO.32
No protein-ligand interaction detected (PLIP)EDO.31: 10 residues within 4Å:- Chain B: E.212, N.214, N.242, I.245, G.248, V.249, A.250, H.283, E.285
- Ligands: SR.22
4 PLIP interactions:4 interactions with chain B- Water bridges: B:E.212, B:N.242, B:N.242, B:H.283
EDO.32: 5 residues within 4Å:- Chain B: G.351, R.352, Y.353, F.431
- Ligands: EDO.30
2 PLIP interactions:2 interactions with chain B- Hydrogen bonds: B:R.352, B:Y.353
EDO.46: 5 residues within 4Å:- Chain C: V.348, G.351, R.352, Y.353
- Ligands: EDO.48
No protein-ligand interaction detected (PLIP)EDO.47: 10 residues within 4Å:- Chain C: E.212, N.214, N.242, I.245, G.248, V.249, A.250, H.283, E.285
- Ligands: SR.38
4 PLIP interactions:4 interactions with chain C- Water bridges: C:E.212, C:N.242, C:N.242, C:H.283
EDO.48: 5 residues within 4Å:- Chain C: G.351, R.352, Y.353, F.431
- Ligands: EDO.46
2 PLIP interactions:2 interactions with chain C- Hydrogen bonds: C:R.352, C:Y.353
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Browning, C. et al., Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid. To Be Published
- Release Date
- 2019-07-17
- Peptides
- Bacteriophage Phi92 gp150: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
CC
C
- Coordinates
- PDB Format
- Method
- X-RAY DIFFRACTION 1.75 Å
- Oligo State
- homo-trimer
- Ligands
- 24 x SR: STRONTIUM ION(Non-functional Binders)
- 9 x CL: CHLORIDE ION(Non-functional Binders)
- 6 x GOL: GLYCEROL(Non-functional Binders)
- 9 x EDO: 1,2-ETHANEDIOL(Non-functional Binders)
- Links
- RCSB PDBe PDBe-KB PDBj PDBsum CATH PLIP
- Citation
- Browning, C. et al., Crystal structure of the colanidase tailspike protein gp150 of Phage Phi92 complexed with one repeating unit of colanic acid. To Be Published
- Release Date
- 2019-07-17
- Peptides
- Bacteriophage Phi92 gp150: ABC
- SMTL:PDB
- SMTL Chain Id:
PDB Chain Id:A
CB
CC
C