SMTL ID : 6eje.1

Human Xylosyltransferase 1 in complex with peptide PAAEGSGEQDFT

Coordinates

PDB Format

Method

X-RAY DIFFRACTION 2.43 Å

Oligo State

hetero-1-1-mer

Ligands

1 x PO4: PHOSPHATE ION(Non-functional Binders)

PO4.1: 6 residues within 4Å: Chain A: W.184, W.287, S.367, P.368, R.390, K.391 3 PLIP interactions: 3 interactions with chain A Water bridges: A:W.287 Salt bridges: A:R.390, A:K.391

1 x NA: SODIUM ION(Non-functional Binders)

NA.2: 4 residues within 4Å: Chain A: S.167, Y.170, S.171, V.173 1 PLIP interactions: 1 interactions with chain A Hydrogen bonds: A:V.173

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Briggs, D.C. et al., Structural Basis for the Initiation of Glycosaminoglycan Biosynthesis by Human Xylosyltransferase 1. Structure (2018)

Release Date

2018-05-02

Peptides

Xylosyltransferase 1: A
Syndecan-1: B

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
B

Xylosyltransferase 1

Syndecan-1

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