SMTL ID : 6f5p.1

A mechanism for the activation of the influenza virus transcriptase

Coordinates

PDB Format Compare

Method

X-RAY DIFFRACTION 4.14 Å

Oligo State

hetero-2-2-2-1-1-mer

Ligands

4 x MG: MAGNESIUM ION(Non-covalent)

MG.1: 6 residues within 4Å: Chain A: H.41, D.93, E.104, I.105, K.119 Ligands: MG.2 1 PLIP interactions: 1 interactions with chain A Metal complexes: A:E.104 MG.2: 5 residues within 4Å: Chain A: E.65, L.91, D.93, E.104 Ligands: MG.1 No protein-ligand interaction detected (PLIP) MG.3: 6 residues within 4Å: Chain B: H.41, D.93, E.104, I.105, K.119 Ligands: MG.4 1 PLIP interactions: 1 interactions with chain B Metal complexes: B:E.104 MG.4: 5 residues within 4Å: Chain B: E.65, L.91, D.93, E.104 Ligands: MG.3 No protein-ligand interaction detected (PLIP)

Links

RCSB   PDBe   PDBe-KB   PDBj   PDBsum   CATH   PLIP

Citation

Serna Martin, I. et al., A Mechanism for the Activation of the Influenza Virus Transcriptase. Mol. Cell (2018)

Release Date

2018-09-19

Peptides

Polymerase acidic protein: AB
RNA-directed RNA polymerase catalytic subunit: CD
Polymerase basic protein 2: EF
DNA-directed RNA polymerase subunit: G
ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA: H

SMTL:PDB

SMTL Chain Id:
PDB Chain Id:

A
A

B
D

C
B

D
C

E
E

F
F

G
G

H
H

Polymerase acidic protein

RNA-directed RNA polymerase catalytic subunit

Polymerase basic protein 2

DNA-directed RNA polymerase subunit

ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA-ALA

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