SMTL ID : 6frk.1

Structure of a prehandover mammalian ribosomal SRP and SRP receptor targeting complex

Coordinates
PDB Format
Method
ELECTRON MICROSCOPY
Oligo State
hetero-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-1-mer
Ligands
133 x MG: MAGNESIUM ION(Non-functional Binders)(Non-covalent)
3 x ZN: ZINC ION(Non-covalent)
1 x GTP: GUANOSINE-5'-TRIPHOSPHATE(Covalent)
2 x GNP: PHOSPHOAMINOPHOSPHONIC ACID-GUANYLATE ESTER(Non-covalent)
Links
RCSB   PDBe   PDBj   PDBsum   CATH   PLIP
Citation
Kobayashi, K. et al., Structure of a prehandover mammalian ribosomal SRP·SRP receptor targeting complex. Science (2018)
Release Date
2018-03-28
Peptides
Ribosomal protein eL28: C
Ribosomal protein L12: D
60S acidic ribosomal protein P0: F
Ribosomal protein L8: I
Ribosomal protein uL3: J
Ribosomal protein uL4: K
Ribosomal protein uL18: L
Ribosomal protein eL6: M
Ribosomal protein uL30: N
Ribosomal protein eL8: O
Ribosomal protein uL6: P
Ribosomal protein uL16: Q
Ribosomal protein uL5: R
Ribosomal protein eL13: S
Ribosomal protein eL14: T
Ribosomal protein L15: U
Ribosomal protein uL13: V
Ribosomal protein uL22: W
Ribosomal protein eL18: X
Ribosomal protein eL19: Y
Ribosomal protein eL20: Z
Ribosomal protein eL21: 0
Ribosomal protein eL22: 1
Ribosomal protein L23: 2
Ribosomal protein eL24: 3
Ribosomal protein uL23: 4
Ribosomal protein uL24: 5
60S ribosomal protein L27: 6
Ribosomal protein uL15: 7
60S ribosomal protein L29: 8
Ribosomal protein eL30: 9
Ribosomal protein eL31: a
Ribosomal protein eL32: b
Ribosomal protein eL33: c
Ribosomal protein eL34: d
Ribosomal protein uL29: e
Ribosomal protein eL36: f
Ribosomal protein L37: g
Ribosomal protein eL38: h
Ribosomal protein eL39: i
Ribosomal protein eL40: j
Ribosomal protein eL41: k
Ribosomal protein eL42: l
Ribosomal protein eL43: m
Signal recognition particle subunit SRP19: n
Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72: o
Signal sequence: p
Signal recognition particle subunit SRP68: q
SRP receptor beta subunit: r
Signal recognition particle 9 kDa protein: s
Signal recognition particle 54 kDa protein: t
SRP receptor alpha subunit: u
Signal recognition particle 14 kDa protein: v
SMTL:PDB
SMTL Chain Id:
PDB Chain Id:
C
3
D
4
F
6
I
A
J
B
K
C
L
D
M
E
N
F
O
G
P
H
Q
I
R
J
S
L
T
M
U
N
V
O
W
P
X
Q
Y
R
Z
S
0
T
1
U
2
V
3
W
4
X
5
Y
6
Z
7
a
8
b
9
c
a
d
b
e
c
f
d
g
e
h
f
i
g
j
h
k
i
l
j
m
k
n
l
o
m
p
n
q
o
r
p
t
q
u
r
v
s
w
t
x
u
y
v
z

Ribosomal protein eL28

Ribosomal protein L12

60S acidic ribosomal protein P0

Ribosomal protein L8

Ribosomal protein uL3

Ribosomal protein uL4

Ribosomal protein uL18

Ribosomal protein eL6

Ribosomal protein uL30

Ribosomal protein eL8

Ribosomal protein uL6

Ribosomal protein uL16

Ribosomal protein uL5

Ribosomal protein eL13

Ribosomal protein eL14

Ribosomal protein L15

Ribosomal protein uL13

Ribosomal protein uL22

Ribosomal protein eL18

Ribosomal protein eL19

Ribosomal protein eL20

Ribosomal protein eL21

Ribosomal protein eL22

Ribosomal protein L23

Ribosomal protein eL24

Ribosomal protein uL23

Ribosomal protein uL24

60S ribosomal protein L27

Ribosomal protein uL15

60S ribosomal protein L29

Ribosomal protein eL30

Ribosomal protein eL31

Ribosomal protein eL32

Ribosomal protein eL33

Ribosomal protein eL34

Ribosomal protein uL29

Ribosomal protein eL36

Ribosomal protein L37

Ribosomal protein eL38

Ribosomal protein eL39

Ribosomal protein eL40

Ribosomal protein eL41

Ribosomal protein eL42

Ribosomal protein eL43

Signal recognition particle subunit SRP19

Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72,Signal recognition particle subunit SRP72

Signal sequence

Signal recognition particle subunit SRP68

SRP receptor beta subunit

Signal recognition particle 9 kDa protein

Signal recognition particle 54 kDa protein

SRP receptor alpha subunit

Signal recognition particle 14 kDa protein

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2j37.1 | 3j7o.1 | 3j7p.2 | 3j7p.3 | 3j7p.5 | 3j7p.6 | 3j7p.9 | 3j7p.11 | 3j7p.16 | 3j7p.36 | 3j7p.42 | 3j7p.43 | 3j7p.44 | 3j7q.1 | 3j7r.2 | 3j7r.3 | 3j7r.5 | 3j7r.6 | 3j7r.9 | 3j7r.15 | 3j7r.35 | 3j7r.41 | 3j7r.42 | 3jag.1 | 3jag.13 | 3jag.16 | 3jag.17 | 3jag.18 | 3jag.19 | 3jag.20  more...